PF00244 14-3-3 protein PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PF04029 2-phosphosulpholactate phosphatase PF02834 2',5' RNA ligase family PF08793 2-cysteine adaptor domain PF08521 Two-component sensor kinase N-terminal PF03171 2OG-Fe(II) oxygenase superfamily PF03475 3-alpha domain PF06983 3-demethylubiquinone-9 3-methyltransferase PF06052 3-hydroxyanthranilic acid dioxygenase PF01612 3'-5' exonuclease PF00803 3A/RNA2 movement protein family PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family PF06725 3D domain PF02829 3H domain PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PF05902 4.1 protein C-terminal domain (CTD) PF04419 4F5 protein family PF03061 Thioesterase superfamily PF01812 5-formyltetrahydrofolate cyclo-ligase family PF06189 5'-nucleotidase PF09038 Tumour suppressor p53-binding protein-1 Tudor PF01367 5'-3' exonuclease, C-terminal SAM fold PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PF05761 5' nucleotidase family PF02872 5'-nucleotidase, C-terminal domain PF03491 Serotonin (5-HT) neurotransmitter transporter, N-terminus PF07694 5TMR of 5TMR-LYT PF02096 60Kd inner membrane protein PF01591 6-phosphofructo-2-kinase PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PF02495 7kD viral coat protein PF02294 7kD DNA-binding domain PF07698 7TM receptor with intracellular HD hydrolase PF00001 7 transmembrane receptor (rhodopsin family) PF00002 7 transmembrane receptor (Secretin family) PF00003 7 transmembrane receptor (metabotropic glutamate family) PF01461 7TM chemoreceptor PF02949 7tm Odorant receptor PF08395 7tm Chemosensory receptor PF07695 7TM diverse intracellular signalling PF07696 7TMR-DISM extracellular 2 PF07697 7TM-HD extracellular PF07388 Alpha-2,8-polysialyltransferase (POLYST) PF07966 A1 Propeptide PF08792 A2L zinc ribbon domain PF00207 Alpha-2-macroglobulin family PF07678 A-macroglobulin complement component PF01835 Alpha-2-macroglobulin family N-terminal region PF07703 Alpha-2-macroglobulin family N-terminal region PF07677 A-macroglobulin receptor PF02177 Amyloid A4 extracellular domain PF01356 Alpha amylase inhibitor PF02137 Adenosine-deaminase (editase) domain PF00962 Adenosine/AMP deaminase PF08451 Adenosine/AMP deaminase N-terminal PF09713 Plant protein 1589 of unknown function (A_thal_3526) PF00696 Amino acid kinase family PF00324 Amino acid permease PF08403 Amino acid permease N-terminal PF01490 Transmembrane amino acid transporter protein PF00004 ATPase family associated with various cellular activities (AAA) PF07724 ATPase family associated with various cellular activities (AAA) PF07726 ATPase family associated with various cellular activities (AAA) PF04326 Divergent AAA domain PF07728 ATPase family associated with various cellular activities (AAA) PF08298 PrkA AAA domain PF03306 Alpha-acetolactate decarboxylase PF04611 Mating type protein A alpha Y mating type dependent binding region PF05282 AAR2 protein PF08142 AARP2CN (NUC121) domain PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase PF07247 Alcohol acetyltransferase PF02496 ABA/WDS induced protein PF00950 ABC 3 transport family PF03109 ABC1 family PF01061 ABC-2 type transporter PF00664 ABC transporter transmembrane region PF06472 ABC transporter transmembrane region 2 PF04392 ABC transporter substrate binding protein PF00005 ABC transporter PF05270 Alpha-L-arabinofuranosidase B (ABFB) PF03806 AbgT putative transporter family PF04083 ab-hydrolase associated lipase region PF00561 alpha/beta hydrolase fold PF02230 Phospholipase/Carboxylesterase PF07859 alpha/beta hydrolase fold PF08386 TAP-like protein PF02517 CAAX amino terminal protease family PF07751 Abi-like protein PF07815 Abl-interactor HHR PF03992 Antibiotic biosynthesis monooxygenase PF09441 ARS binding protein 2 PF00887 Acyl CoA binding protein PF08326 Acetyl-CoA carboxylase, central region PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PF00871 Acetokinase family PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation PF08882 Acetone carboxylase gamma subunit PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PF00583 Acetyltransferase (GNAT) family PF00797 N-acetyltransferase PF08674 Acetylcholinesterase tetramerisation domain PF00328 Histidine acid phosphatase PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) PF05882 ACN9 family PF00330 Aconitase family (aconitate hydratase) PF06434 Aconitate hydratase 2 N-terminus PF00694 Aconitase C-terminal domain PF01756 Acyl-CoA oxidase PF05777 Drosophila accessory gland-specific peptide 26Ab (Acp26Ab) PF06313 Drosophila ACP53EA protein PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PF01648 4'-phosphopantetheinyl transferase superfamily PF00873 AcrB/AcrD/AcrF family PF01842 ACT domain PF09192 Actin-fragmin kinase, catalytic PF05058 ActA Protein PF00976 Corticotropin ACTH domain PF00022 Actin PF01064 Activin types I and II receptor domain PF01643 Acyl-ACP thioesterase PF00441 Acyl-CoA dehydrogenase, C-terminal domain PF08028 Acyl-CoA dehydrogenase, C-terminal domain PF02770 Acyl-CoA dehydrogenase, middle domain PF02771 Acyl-CoA dehydrogenase, N-terminal domain PF02551 Acyl-CoA thioesterase PF00698 Acyl transferase domain PF02273 Acyl transferase PF01757 Acyltransferase family PF00708 Acylphosphatase PF01553 Acyltransferase PF08509 Adenylate cyclase G-alpha binding domain PF02805 Metal binding domain of Ada PF08516 ADAM cysteine-rich PF05986 ADAM-TS Spacer 1 PF00928 Adaptor complexes medium subunit family PF01602 Adaptin N terminal region PF06314 Acetoacetate decarboxylase (ADC) PF02618 Aminodeoxychorismate lyase PF03352 Methyladenine glycosylase PF02438 Late 100kD protein PF03052 Adenoviral protein 52K PF02703 Early E1A protein PF01691 Adenovirus E1B 19K protein / small t-antigen PF01696 Adenovirus EB1 55K protein / large t-antigen PF04623 Adenovirus E1B protein N-terminus PF06040 Adenovirus E3 protein PF04834 Early E3 14.5 kDa protein PF03307 Adenovirus 15.3kD protein in E3 region PF02440 Adenovirus E3 region protein CR1 PF02439 Adenovirus E3 region protein CR2 PF05248 Adenovirus E3A PF03376 Adenovirus E3B protein PF05385 Mastadenovirus early E4 13 kDa protein PF04528 Adenovirus early E4 34 kDa protein conserved region PF06931 Mastadenovirus E4 ORF3 protein PF04881 Adenovirus GP19K PF01065 Hexon, adenovirus major coat protein, N-terminal domain PF03678 Hexon, adenovirus major coat protein, C-terminal domain PF02456 Adenovirus IVa2 protein PF00541 Adenoviral fibre protein (knob domain) PF01686 Adenovirus penton base protein PF03955 Adenovirus hexon-associated protein (IX) PF03910 Adenovirus minor core protein PV PF01310 Adenovirus hexon associated protein, protein VIII PF05829 Adenovirus late L2 mu core protein (Protein X) PF00608 Adenoviral fibre protein (repeat/shaft region) PF02459 Adenoviral DNA terminal protein PF03228 Adenoviral core protein VII PF04008 Adenosine specific kinase PF04439 Streptomycin adenylyltransferase PF01295 Adenylate cyclase, class-I PF00709 Adenylosuccinate synthetase PF08240 Alcohol dehydrogenase GroES-like domain PF00106 short chain dehydrogenase PF00107 Zinc-binding dehydrogenase PF09085 Adhesion molecule, immunoglobulin-like PF04619 Dr-family adhesin PF03257 Mycoplasma adhesin P1 PF06377 Adipokinetic hormone PF00406 Adenylate kinase PF05191 Adenylate kinase, active site lid PF05221 S-adenosyl-L-homocysteine hydrolase PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain PF02675 S-adenosylmethionine decarboxylase PF01941 S-adenosylmethionine synthetase (AdoMet synthetase) PF08132 S-adenosyl-l-methionine decarboxylase leader peptide PF04587 ADP-specific Phosphofructokinase/Glucokinase conserved region PF03747 ADP-ribosylglycohydrolase PF02039 Adrenomedullin PF06355 Aegerolysin PF01117 Aerolysin toxin PF05110 AF-4 proto-oncoprotein PF05775 Enterobacteria AfaD invasin protein PF03969 AFG1-like ATPase PF08493 Aflatoxin regulatory protein PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain PF02420 Insect antifreeze protein repeat PF03756 A-factor biosynthesis repeat PF08731 Transcription factor AFT PF04671 Erythrocyte membrane-associated giant protein antigen 332 PF05641 Agenet domain PF07468 Agglutinin PF05039 Agouti protein PF04647 Accessory gene regulator B PF05931 Staphylococcal AgrD protein PF04730 Agrobacterium VirD5 protein PF06396 Angiotensin II, type I receptor-associated protein (AGTRAP) PF09229 Activator of Hsp90 ATPase, N-terminal PF00578 AhpC/TSA family PF02682 Allophanate hydrolase subunit 1 PF02626 Allophanate hydrolase subunit 2 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PF09236 Alpha-haemoglobin stabilising protein PF01808 AICARFT/IMPCHase bienzyme PF04548 AIG1 family PF06094 AIG2-like family PF06316 Enterobacterial Ail/Lom protein PF03915 Actin interacting protein 3 PF00731 AIR carboxylase PF00586 AIR synthase related protein, N-terminal domain PF02769 AIR synthase related protein, C-terminal domain PF04988 A-kinase anchoring protein 95 (AKAP95) PF05716 A-kinase anchor protein 110 kDa (AKAP 110) PF00842 Alanine racemase, C-terminal domain PF01168 Alanine racemase, N-terminal domain PF00490 Delta-aminolevulinic acid dehydratase PF01262 Alanine dehydrogenase/PNT, C-terminal domain PF05222 Alanine dehydrogenase/PNT, N-terminal domain PF09135 Alb1 PF01918 Alba PF05583 Albicidin resistance domain PF08027 Albumin I PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PF02738 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain PF00171 Aldehyde dehydrogenase family PF00248 Aldo/keto reductase family PF01081 KDPG and KHG aldolase PF00596 Class II Aldolase and Adducin N-terminal domain PF01263 Aldose 1-epimerase PF03752 Short repeats of unknown function PF08660 Oligosaccharide biosynthesis protein Alg14 like PF05208 ALG3 protein PF03155 ALG6, ALG8 glycosyltransferase family PF05426 Alginate lyase PF08787 Alginate lyase PF00245 Alkaline phosphatase PF06029 AlkA N-terminal domain PF03561 Allantoicase repeat PF05953 Allatostatin PF06351 Allene oxide cyclase PF05549 Allexivirus 40kDa protein PF04864 Allinase PF04030 D-arabinono-1,4-lactone oxidase PF09608 Putative transmembrane protein (Alph_Pro_TM) PF06401 Alpha-2-macroglobulin RAP, C-terminal domain PF06400 Alpha-2-macroglobulin RAP, N-terminal domain PF09071 Alpha-amylase, C terminal PF07821 Alpha-amylase C-terminal beta-sheet domain PF00128 Alpha amylase, catalytic domain PF02806 Alpha amylase, C-terminal all-beta domain PF02903 Alpha amylase, N-terminal ig-like domain PF06964 Alpha-L-arabinofuranosidase C-terminus PF09261 Alpha mannosidase, middle domain PF02296 Alpha adaptin AP2, C-terminal domain PF02883 Adaptin C-terminal domain PF01589 Alphavirus E1 glycoprotein PF00943 Alphavirus E2 glycoprotein PF01563 Alphavirus E3 glycoprotein PF03229 Alphavirus glycoprotein J PF02816 Alpha-kinase family PF01120 Alpha-L-fucosidase PF02232 Alpha trans-inducing protein (Alpha-TIF) PF08829 Alpha C protein N terminal PF06838 Aluminium resistance protein PF02430 Apical membrane antigen 1 PF07344 Amastin surface glycoprotein PF03913 Amb V Allergen PF05111 Ameloblastin precursor (Amelin) PF02948 Amelogenin PF04709 Anti-Mullerian hormone, N terminal region PF01425 Amidase PF01510 N-acetylmuramoyl-L-alanine amidase PF01520 N-acetylmuramoyl-L-alanine amidase PF05382 Bacteriophage peptidoglycan hydrolase PF02274 Amidinotransferase PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) PF01979 Amidohydrolase family PF04909 Amidohydrolase PF07969 Amidohydrolase family PF01593 Flavin containing amine oxidoreductase PF00155 Aminotransferase class I and II PF00202 Aminotransferase class-III PF01063 Aminotransferase class IV PF00266 Aminotransferase class-V PF02293 AmiS/UreI family transporter PF01871 AMMECR1 PF00909 Ammonium Transporter Family PF02461 Ammonia monooxygenase PF05145 Putative ammonia monooxygenase PF04896 Ammonia monooxygenase/methane monooxygenase, subunit C PF03782 AMOP domain PF00501 AMP-binding enzyme PF05195 Aminopeptidase P, N-terminal domain PF04739 5'-AMP-activated protein kinase, beta subunit, complex-interacting region PF03098 Animal haem peroxidase PF01821 Anaphylotoxin-like domain PF02166 Androgen receptor PF06369 Sea anemone cytotoxic protein PF01094 Receptor family ligand binding region PF03139 Vanadium/alternative nitrogenase delta subunit PF09582 Iron only nitrogenase protein AnfO (AnfO_nitrog) PF00023 Ankyrin repeat PF07260 Progressive ankylosis protein (ANKH) PF00191 Annexin PF00212 Atrial natriuretic peptide PF03452 Anp1 PF03374 Phage antirepressor protein PF05586 Anthrax receptor C-terminus region PF08346 AntA/AntB antirepressor PF03861 ANTAR domain PF07651 ANTH domain PF05587 Anthrax receptor extracellular domain PF04715 Anthranilate synthase component I, N terminal region PF09156 Anthrax toxin lethal factor, middle domain PF03497 Anthrax toxin LF subunit PF04729 Anti-silencing protein, ASF1-like PF02522 Aminoglycoside 3-N-acetyltransferase PF08264 Anticodon-binding domain PF09255 Caf1 Capsule antigen PF08105 Metchnikowin family PF08106 Formaecin family PF08107 Pleurocidin family PF08108 Halocidin family PF08109 Lactocin 705 family PF08110 Ocellatin family PF08128 Double glycine cleavage site bacteriolysin PF08129 Alpha/beta enterocin family PF08130 Type A lantibiotic family PF08225 Pseudin antimicrobial peptide PF08256 Aurein-like antibiotic peptide PF08018 Frog antimicrobial peptide PF08023 Frog antimicrobial peptide PF08025 Spider antimicrobial peptide PF08024 Ant antimicrobial peptide PF08026 Bee antimicrobial peptide PF08036 Diapausin family of antimicrobial peptide PF08102 Scorpion antimicrobial peptide PF08103 Uperin family PF08104 Ponericin L family PF03230 Antirestriction protein PF02822 Antistasin family PF03589 Antitermination protein PF01786 Alternative oxidase PF00847 AP2 domain PF01261 Xylose isomerase-like TIM barrel PF07582 AP endonuclease family 2 C terminus PF02558 Ketopantoate reductase PanE/ApbA PF08546 Ketopantoate reductase PanE/ApbA C terminal PF02424 ApbE family PF03256 Anaphase-promoting complex, subunit 10 (APC10) PF05839 Apc13p protein PF05841 Apc15p protein PF08672 Anaphase promoting complex (APC) subunit 2 PF04049 Anaphase promoting complex subunit 8 / Cdc23 PF05972 APC 15 residue motif PF05956 APC basic domain PF05923 APC cysteine-rich region PF04110 Ubiquitin-like autophagy protein Apg12 PF04108 Autophagy protein Apg17 PF04106 Autophagy protein Apg5 PF04111 Autophagy protein Apg6 PF04109 Autophagy protein Apg9 PF01636 Phosphotransferase enzyme family PF06105 Aph-1 protein PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase PF05875 Alkaline phytoceramidase (aPHC) PF05918 Apoptosis inhibitory protein 5 (API5) PF00807 Apidaecin PF05355 Apolipoprotein C-II PF05778 Apolipoprotein CIII (Apo-CIII) PF05418 Apovitellenin I (Apo-VLDL-II) PF04711 Apolipoprotein A-II (ApoA-II) PF05240 APOBEC-like C-terminal domain PF08210 APOBEC-like N-terminal domain PF04691 Apolipoprotein C-I (ApoC-1) PF01333 Apocytochrome F, C-terminal PF05461 Apolipoprotein L PF01442 Apolipoprotein A1/A4/E domain PF07464 Apolipophorin-III precursor (apoLp-III) PF01583 Adenylylsulphate kinase PF02292 APSES domain PF03440 Aerolysin/Pertussis toxin (APT) domain PF06079 Apyrase PF09206 Alpha-L-arabinofuranosidase B, catalytic PF02610 L-arabinose isomerase PF04602 Mycobacterial cell wall arabinan synthesis protein PF02311 AraC-like ligand binding domain PF06445 Bacterial transcription activator, effector binding domain PF06719 AraC-type transcriptional regulator N-terminus PF09692 Argonaute siRNA chaperone (ARC) complex subunit Arb1 PF03869 Arc-like DNA binding domain PF09606 ARC105 domain PF06819 Archaeal Peptidase A24 C-terminal Domain PF06847 Archaeal Peptidase A24 C-terminus Type II PF08394 Archaeal TRASH domain PF01637 Archaeal ATPase PF04659 Archaeal flagella protein PF01917 Archaebacterial flagellin PF03079 ARD/ARD' family PF07275 Antirestriction protein (ArdA) PF07573 Nitrogen regulatory protein AreA N terminus PF00798 Arenavirus glycoprotein PF00843 Arenavirus nucleocapsid protein PF06317 Arenavirus RNA polymerase PF00025 ADP-ribosylation factor family PF06456 Arfaptin-like domain PF01412 Putative GTPase activating protein for Arf PF01316 Arginine repressor, DNA binding domain PF02863 Arginine repressor, C-terminal domain PF03485 Arginyl tRNA synthetase N terminal domain PF00491 Arginase family PF00764 Arginosuccinate synthase PF01960 ArgJ family PF03308 ArgK protein PF01388 ARID/BRIGHT DNA binding domain PF06770 Actin-rearrangement-inducing factor (Arif-1) PF00514 Armadillo/beta-catenin-like repeat PF04683 Adhesion regulating molecule conserved region PF07302 AroM protein PF05856 ARP2/3 complex 20 kDa subunit (ARPC4) PF02752 Arrestin (or S-antigen), C-terminal domain PF00339 Arrestin (or S-antigen), N-terminal domain PF04959 Arsenite-resistance protein 2 PF02374 Anion-transporting ATPase PF02040 Arsenical pump membrane protein PF03960 ArsC family PF06953 Arsenical resistance operon trans-acting repressor ArsD PF01129 NAD:arginine ADP-ribosyltransferase PF01606 Arterivirus envelope protein PF00951 Arterivirus GL envelope glycoprotein PF02497 Arterivirus glycoprotein PF01481 Arterivirus nucleocapsid protein PF04161 Arv1-like family PF01731 Arylesterase PF05935 Arylsulfotransferase (ASST) PF00858 Amiloride-sensitive sodium channel PF04266 ASCH domain PF08688 Apx/Shroom domain ASD1 PF08687 Apx/Shroom domain ASD2 PF01671 African swine fever virus multigene family 360 protein PF05568 African swine fever virus J13L protein PF05293 African swine fever virus (ASFV) L11L protein PF06556 IAP-like protein p27 C-terminus PF09010 Anti-Sigma Factor A PF08328 Adenylosuccinate lyase C-terminal PF05170 AsmA family PF00733 Asparagine synthase PF03590 Aspartate-ammonia ligase PF01037 AsnC family PF00026 Eukaryotic aspartyl protease PF06826 Predicted Permease Membrane Region PF05279 Aspartyl beta-hydroxylase N-terminal region PF05118 Aspartyl/Asparaginyl beta-hydroxylase PF02261 Aspartate decarboxylase PF01177 Asp/Glu/Hydantoin racemase PF09668 Aspartyl protease PF00710 Asparaginase PF01112 Asparaginase PF06089 L-asparaginase II PF06392 Acid shock protein repeat PF04958 Arginine N-succinyltransferase beta subunit PF01400 Astacin (Peptidase family M12A) PF04996 Succinylarginine dihydrolase PF04952 Succinylglutamate desuccinylase / Aspartoacylase family PF03115 Astrovirus capsid protein precursor PF02178 AT hook motif PF04377 Arginine-tRNA-protein transferase, C terminus PF04376 Arginine-tRNA-protein transferase, N terminus PF08614 Autophagy protein 16 (ATG16) PF09451 Autophagy-related protein 27 PF09333 ATG C terminal domain PF03078 ATHILA ORF-1 family PF07737 Anthrax toxin lethal factor, N- and C-terminal domain PF03477 ATP cone domain PF02222 ATP-grasp domain PF08442 ATP-grasp domain PF02655 ATP-grasp domain PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain PF02807 ATP:guanido phosphotransferase, N-terminal domain PF01747 ATP-sulfurylase PF00231 ATP synthase PF05176 ATP10 protein PF00895 ATP synthase protein 8 PF00119 ATP synthase A chain PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PF00306 ATP synthase alpha/beta chain, C terminal domain PF02874 ATP synthase alpha/beta family, beta-barrel domain PF00430 ATP synthase B/B' CF(0) PF00137 ATP synthase subunit C PF01813 ATP synthase subunit D PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PF05680 ATP synthase E chain PF08112 ATP synthase epsilon subunit PF04627 Mitochondrial ATP synthase epsilon chain PF01990 ATP synthase (F/14-kDa) subunit PF05511 Mitochondrial ATP synthase coupling factor 6 PF04718 Mitochondrial ATP synthase g subunit PF04911 ATP synthase j chain PF05827 Vacuolar ATP synthase subunit S1 (ATP6S1) PF06644 ATP11 protein PF07542 ATP12 chaperone protein PF02038 ATP1G1/PLM/MAT8 family PF03029 Conserved hypothetical ATP binding protein PF03668 P-loop ATPase protein family PF01171 PP-loop family PF01902 ATP-binding region PF05493 ATP synthase subunit H PF03899 ATP synthase I chain PF09527 Putative F0F1-ATPase subunit (ATPase_gene1) PF05353 Delta Atracotoxin PF03154 Atrophin-1 family PF06232 Embryo-specific protein 3, (ATS3) PF03769 Attacin, C-terminal region PF03768 Attacin, N-terminal region PF08037 Attractin family PF08098 Anemonia sulcata toxin III family PF09041 Aurora-A binding PF06677 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) PF03472 Autoinducer binding domain PF00765 Autoinducer synthetase PF03987 Autophagocytosis associated protein, C-terminal domain PF03986 Autophagocytosis associated protein, N-terminal domain PF03797 Autotransporter beta-domain PF02309 AUX/IAA family PF02041 Auxin binding protein PF02519 Auxin responsive protein PF05564 Dormancy/auxin associated protein PF06507 Auxin response factor PF06536 Avian adenovirus fibre PF03708 Avian retrovirus envelope protein, gp85 PF01382 Avidin family PF03377 Xanthomonas avirulence protein, Avr/PthA PF05394 Avirulence protein PF05655 Pseudomonas avirulence D protein (AvrD) PF09143 AvrPphF-ORF-2 PF09046 AvrPtoB E3 ubiquitin ligase PF05512 AWPM-19-like family PF05448 Acetyl xylan esterase (AXE1) PF08517 Ataxin-1 and HBP1 module (AXH) PF08833 Axin beta-catenin binding domain PF03591 AzlC protein PF05437 Branched-chain amino acid transport protein (AzlD) PF02216 B domain PF04182 B-block binding subunit of TFIIIC PF02246 Protein L b1 domain PF02310 B12 binding domain PF02607 B12 binding domain PF06522 B12D protein PF09066 Beta2-adaptin appendage, C-terminal sub-domain PF02362 B3 DNA binding domain PF03483 B3/4 domain PF03484 tRNA synthetase B5 domain PF01603 Protein phosphatase 2A regulatory B subunit (B56 family) PF07162 B9 protein PF01453 D-mannose binding lectin PF07886 BA14K-like protein PF06989 BAALC N-terminus PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal PF05468 Bacillus ATP synthase I PF02043 Bacteriochlorophyll C binding protein PF00216 Bacterial DNA-binding protein PF00308 Bacterial dnaA protein PF08299 Bacterial dnaA protein helix-turn-helix domain PF01311 Bacterial export proteins, family 1 PF01312 FlhB HrpN YscU SpaS Family PF01313 Bacterial export proteins, family 3 PF05088 Bacterial NAD-glutamate dehydrogenase PF01152 Bacterial-like globin PF00296 Luciferase-like monooxygenase PF05592 Bacterial alpha-L-rhamnosidase PF08531 Alpha-L-rhamnosidase N-terminal domain PF01036 Bacteriorhodopsin PF09501 Probable sporulation protein (Bac_small_yrzI) PF01103 Surface antigen PF01338 Bacillus thuringiensis toxin PF02397 Bacterial sugar transferase PF01654 Bacterial Cytochrome Ubiquinol Oxidase PF02673 Bacitracin resistance protein BacA PF05791 Bacillus haemolytic enterotoxin (HBL) PF05968 Bacillus PapR protein PF07707 BTB And C-terminal Kelch PF08379 Bacterial transglutaminase-like N-terminal region PF09221 Bacteriocin AS-48 PF01721 Class II bacteriocin PF06143 Baculovirus 11 kDa family PF04798 Baculovirus 19 kDa protein conserved region PF04631 Baculovirus hypothetical protein PF06096 Baculoviridae 8.2 KDa protein PF04786 ssDNA binding protein PF05274 Occlusion-derived virus envelope protein E25 PF04639 Baculoviral E56 protein, specific to ODV envelope PF04850 Baculovirus E66 occlusion-derived virus envelope protein PF03258 Baculovirus FP protein PF04700 Structural glycoprotein p40/gp41 conserved region PF03273 Baculovirus gp64 envelope glycoprotein family PF04735 Baculovirus DNA helicase PF05290 Baculovirus immediate-early protein (IE-0) PF07206 Baculovirus late expression factor 10 (LEF-10) PF06385 Baculovirus LEF-11 protein PF03041 lef-2 PF05847 Nucleopolyhedrovirus late expression factor 3 (LEF-3) PF04838 Baculoviridae late expression factor 5 PF06061 Baculoviridae ME53 PF05314 Baculovirus occlusion-derived virus envelope protein EC27 PF05073 Baculovirus P24 capsid protein PF04766 Nucleopolyhedrovirus p26 protein PF05214 Baculovirus P33 PF05112 Baculovirus P47 protein PF04878 Baculovirus P48 protein PF04583 Baculoviridae p74 conserved region PF08404 Baculoviridae P74 N-terminal PF04513 Baculovirus polyhedron envelope protein, PEP, C terminus PF04512 Baculovirus polyhedron envelope protein, PEP, N terminus PF05311 Baculovirus 33KDa late protein (PP31) PF05789 Baculovirus VP1054 protein PF04501 Baculovirus major capsid protein VP39 PF08475 Viral capsid protein 91 N-terminal PF04913 Baculovirus Y142 protein PF02961 Barrier to autointegration factor PF04684 BAF1 / ABF1 chromatin reorganising factor PF09256 BAFF-R, TALL-1 binding PF02179 BAG domain PF08180 B melanoma antigen family PF01426 BAH domain PF06861 BALF1 protein PF06211 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain PF02923 Restriction endonuclease BamHI PF07565 Band 3 cytoplasmic domain PF01145 SPFH domain / Band 7 family PF06639 Basal layer antifungal peptide (BAP) PF05529 B-cell receptor-associated protein 31-like PF03114 BAR domain PF05786 Barren protein PF01337 Barstar (barnase inhibitor) PF00967 Barwin family PF04865 Baseplate J-like protein PF01586 Myogenic Basic domain PF05466 Brain acid soluble protein 1 (BASP1 protein) PF07001 BAT2 N-terminus PF06968 Biotin and Thiamin Synthesis associated domain PF08185 BB1 family PF08031 Berberine and berberine like PF06726 Bladder cancer-related protein BC10 PF05700 Breast carcinoma amplified sequence 2 (BCAS2) PF02028 BCCT family transporter PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) PF02327 Bacteriochlorophyll A protein PF00452 Apoptosis regulator proteins, Bcl-2 family PF04714 BCL7, N-terminal conserver region PF08945 Bcl-x interacting PF09257 BCMA, TALL-1 binding PF07572 Bucentaur or craniofacial development PF09036 Bcr-Abl oncoprotein oligomerisation domain PF01869 BadF/BadG/BcrA/BcrD ATPase family PF08740 BCS1 N terminal PF03170 Bacterial cellulose synthase subunit PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) PF08072 BDHCT (NUC031) domain PF07936 Antihypertensive protein BDS-I/II PF06208 Borna disease virus G protein PF06515 Borna disease virus P10 protein PF06595 Borna disease virus P24 protein PF06407 Borna disease virus P40 protein PF02138 Beige/BEACH domain PF03594 Benzoate membrane transport protein PF03019 Furovirus P26 PF07255 Benyvirus 14KDa protein PF05744 Benyvirus P25 protein PF02944 BESS motif PF01062 Bestrophin PF00407 Pathogenesis-related protein Bet v I family PF03494 Beta-amyloid peptide (beta-APP) PF00144 Beta-lactamase PF09270 Beta-trefoil PF01212 Beta-eliminating lyase PF08667 BetR domain PF04538 Brain expressed X-linked like family PF02929 Beta galactosidase small chain PF02180 Bcl-2 homology region 4 PF06393 BH3 interacting domain (BID) PF08319 ER protein BIG1 PF02369 Bacterial Ig-like domain (group 1) PF02368 Bacterial Ig-like domain (group 2) PF07523 Bacterial Ig-like domain (group 3) PF07532 Bacterial Ig-like domain (group 4) PF04775 Acyl-CoA thioester hydrolase / Bile acid-CoA amino acid N-acetyltransferase PF09166 Biliverdin reductase, catalytic PF06773 Bim protein N-terminus PF06859 Bicoid-interacting protein 3 (Bin3) PF03496 Clostridial binary toxin A PF03495 Clostridial binary toxin B/anthrax toxin PA PF02084 Bindin PF08149 BING4CT (NUC141) domain PF00351 Biopterin-dependent aromatic amino acid hydroxylase PF02785 Biotin carboxylase C-terminal domain PF00364 Biotin-requiring enzyme PF03744 6-carboxyhexanoate--CoA ligase PF02632 BioY family PF06832 Penicillin-Binding Protein C-terminus Family PF00653 Inhibitor of Apoptosis domain PF04197 Birnavirus RNA dependent RNA polymerase (VP1) PF01766 Birnavirus VP2 protein PF01767 Birnavirus VP3 protein PF01768 Birnavirus VP4 protein PF03042 Birnavirus VP5 protein PF05858 Bovine immunodeficiency virus surface envelope protein (ENV) PF03493 Calcium-activated BK potassium channel alpha subunit PF07467 Beta-lactamase inhibitor (BLIP) PF04940 Sensors of blue-light using FAD PF06375 Bovine leukaemia virus receptor (BLVR) PF05289 Borrelia hemolysin accessory protein PF00936 BMC domain PF09146 BmKK2 toxic PF09132 BmKX PF02608 Basic membrane protein PF06553 BNIP3 PF02012 BNR/Asp-box repeat PF07441 SigmaK-factor processing regulatory protein BofA PF08977 Bypass of Forespore C, N terminal PF01722 BolA-like protein PF02044 Bombesin-like peptide PF05298 Bombinin PF08096 Bombolitin family PF04972 Putative phospholipid-binding domain PF08145 BOP1NT (NUC169) domain PF05714 Borrelia burgdorferi virulent strain associated lipoprotein PF06238 Borrelia burgdorferi BBR25 lipoprotein PF02414 Borrelia ORF-A PF02999 Borrelia orf-D family PF04160 Orf-X protein PF05628 Borrelia membrane protein P13 PF05262 Borrelia P83/100 protein PF03183 Borrelia repeat protein PF03978 Borrelia burgdorferi REV protein PF05588 Clostridium botulinum HA-17 protein PF00228 Bowman-Birk serine protease inhibitor family PF08146 BP28CT (NUC211) domain PF00528 Binding-protein-dependent transport system inner membrane component PF02653 Branched-chain amino acid transport system / permease component PF06139 BphX-like PF02237 Biotin protein ligase C terminal domain PF03099 Biotin/lipoate A/B protein ligase family PF08947 BPS (Between PH and SH2) PF06753 Bradykinin PF02485 Core-2/I-Branching enzyme PF05525 Branched-chain amino acid transport protein PF07576 BRCA1-associated protein 2 PF09169 BRCA2, helical PF09103 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 PF09104 BRCA2, oligonucleotide/oligosaccharide-binding, domain 3 PF00634 BRCA2 repeat PF00533 BRCA1 C Terminus (BRCT) domain PF06113 Brain and reproductive organ-expressed protein (BRE) PF08647 BRE1 E3 ubiquitin ligase PF03032 Brevenin/esculentin/gaegurin/rugosin family PF07741 Brf1-like TBP-binding domain PF04089 BRICHOS domain PF04427 Brix domain PF09607 Brinker DNA-binding domain PF02498 BRO family, N-terminal domain PF03097 BRO1-like domain PF01318 Bromovirus coat protein PF01573 Bromovirus movement protein PF07524 Bromodomain associated PF00439 Bromodomain PF05244 Brucella outer membrane protein 2 PF03909 BSD domain PF07832 Cfr10I/Bse634I restriction endonuclease PF04450 Plant Basic Secretory Protein PF05432 Bone sialoprotein II (BSP-II) PF04743 BSRF1-like protein PF08201 BssC/TutF protein PF06616 BsuBI/PstI restriction endonuclease C-terminus PF03092 BT1 family PF05560 Bacillus thuringiensis P21 molecular chaperone protein PF03704 Bacterial transcriptional activator domain PF00651 BTB/POZ domain PF07742 BTG family PF00779 BTK motif PF05232 Bacterial Transmembrane Pair family PF03437 BtpA family PF04514 Bluetongue virus non-structural protein NS2 PF09405 CASC3/Barentsz eIF4AIII binding PF09073 BUD22 PF03401 Bordetella uptake gene (bug) product PF04426 Bul1 C terminus PF04425 Bul1 N terminus PF05307 Bundlin PF03557 Bunyavirus glycoprotein G1 PF03563 Bunyavirus glycoprotein G2 PF01104 Bunyavirus non-structural protein NS-s PF03231 Bunyavirus non-structural protein NS-S PF04804 Non-structural protein NSM PF00952 Bunyavirus nucleocapsid (N) protein PF04196 Bunyavirus RNA dependent RNA polymerase PF03181 BURP domain PF03309 Bordetella pertussis Bvg accessory factor family PF04681 Blastomyces yeast-phase-specific protein PF05291 Bystin PF00170 bZIP transcription factor PF07716 Basic region leucine zipper PF03131 bZIP Maf transcription factor PF08782 c-SKI Smad4 binding domain PF07654 Immunoglobulin C1-set domain PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) PF03107 C1 domain PF07649 C1-like domain PF07975 TFIIH C1-like domain PF00386 C1q domain PF00168 C2 domain PF05790 Immunoglobulin C2-set domain PF08205 CD80-like C2-set immunoglobulin domain PF01413 C-terminal tandem repeated domain in type 4 procollagen PF03595 C4-dicarboxylate transporter/malic acid transport protein PF06662 D-glucuronyl C5-epimerase C-terminus PF01681 C6 domain PF08742 C8 domain PF09719 Putative redox-active protein (C_GCAxxG_C_C) PF02363 Cysteine rich repeat PF08763 Voltage gated calcium channel IQ domain PF00774 Dihydropyridine sensitive L-type calcium channel (Beta subunit) PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PF02743 Cache domain PF08269 Cache domain PF03596 Cadmium resistance transporter PF00028 Cadherin domain PF08266 Cadherin-like PF01049 Cadherin cytoplasmic region PF08758 Cadherin prodomain like PF09232 Caenorhabditis elegans Her-1 PF07440 Caerin 1 protein PF04857 CAF1 family ribonuclease PF03507 CagA exotoxin PF03135 CagE, TrbE, VirB family, component of type IV transporter system PF03524 Conjugal transfer protein PF07337 DC-EC Repeat PF09053 CagZ PF03185 Calcium-activated potassium channel, beta subunit PF00214 Calcitonin / CGRP / IAPP family PF04847 Calcipressin PF07888 Calcium binding and coiled-coil domain (CALCOCO1) like PF06387 D1 dopamine receptor-interacting protein (calcyon) PF02029 Caldesmon PF05042 Caleosin related protein PF00915 Calicivirus coat protein PF08435 Calicivirus coat protein C-terminal PF05752 Calicivirus minor structural protein PF08405 Viral polyprotein N-terminal PF07887 Calmodulin binding protein-like PF01067 Calpain large subunit, domain III PF00748 Calpain inhibitor PF00402 Calponin family repeat PF00262 Calreticulin family PF05556 Calcineurin-binding protein (Calsarcin) PF01216 Calsequestrin PF03160 Calx-beta domain PF07839 Plant calmodulin-binding domain PF02888 Calmodulin binding domain PF08332 Calcium/calmodulin dependent protein kinase II Association PF07373 CAMP factor (Cfa) PF05538 Campylobacter major outer membrane protein PF07537 CamS sex pheromone cAM373 precursor PF05792 Candida agglutinin-like protein (ALS) PF07918 CAP160 repeat PF08603 DE Adenylate cyclase associated (CAP) C terminal PF01302 CAP-Gly domain PF01213 Adenylate cyclase associated (CAP) N terminal PF05704 Capsular polysaccharide synthesis protein PF04451 Iridovirus major capsid protein PF05159 Capsule polysaccharide biosynthesis protein PF00194 Eukaryotic-type carbonic anhydrase PF01256 Carbohydrate kinase PF01039 Carboxyl transferase domain PF05388 Carboxypeptidase Y pro-peptide PF02977 Carboxypeptidase A inhibitor PF08261 Carcinustatin peptide PF00619 Caspase recruitment domain PF02559 CarD-like/TRCF domain PF07705 CARDB PF01623 Carlavirus putative nucleic acid binding protein PF08462 Carmovirus coat protein PF00755 Choline/Carnitine o-acyltransferase PF09150 Orange carotenoid protein, N-terminal PF06373 Cocaine and amphetamine regulated transcript protein (CART) PF07779 Cas1p-like protein PF09559 Cas6 Crispr PF09651 CRISPR-associated protein (Cas_APE2256) PF09670 CRISPR-associated protein (Cas_Cas02710) PF09707 CRISPR-associated protein (Cas_Cas2CT1978) PF09705 CRISPR-associated protein (Cas_Cas5a) PF09704 CRISPR-associated protein (Cas_Cas5d) PF09708 CRISPR-associated protein (Cas_Cas5e) PF09700 CRISPR-associated protein (Cas_Cmr3) PF09701 CRISPR-associated protein (Cas_Cmr5) PF09703 CRISPR-associated protein (Cas_Csa4) PF09702 CRISPR-associated protein (Cas_Csa5) PF09709 CRISPR-associated protein (Cas_Csd1) PF03378 CAS/CSE protein, C-terminus PF09659 CRISPR-associated protein (Cas_Csm6) PF09711 CRISPR-associated protein (Cas_Csn2) PF09620 CRISPR-associated protein (Cas_csx3) PF09657 CRISPR-associated protein Csx8 (Cas_Csx8) PF09658 CRISPR-associated protein (Cas_Csx9) PF09611 CRISPR-associated protein (Cas_Csy1) PF09614 CRISPR-associated protein (Cas_Csy2) PF09615 CRISPR-associated protein (Cas_Csy3) PF09618 CRISPR-associated protein (Cas_Csy4) PF09344 CT1975-like protein PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) PF09455 CRISPR-associated (Cas) DxTHG family PF09617 CRISPR-associated protein GSU0053 (Cas_GSU0053) PF09609 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) PF09484 CRISPR-associated protein TM1802 (cas_TM1802) PF09530 CRISPR-associated protein (cas_TM1812) PF09652 Putative CRISPR-associated protein (Cas_VVA1548) PF00363 Casein PF00997 Kappa casein PF08172 CASP C terminal PF00302 Chloramphenicol acetyltransferase PF03123 CAT RNA binding domain PF00199 Catalase PF06628 Catalase-related PF00666 Cathelicidin PF08773 Cathepsin C exclusion domain PF00689 Cation transporting ATPase, C-terminus PF00690 Cation transporter/ATPase, N-terminus PF01545 Cation efflux family PF04731 Caudal like protein activation region PF02413 Caudovirales tail fibre assembly protein PF03233 Aphid transmission protein PF03310 Caulimovirus DNA-binding protein PF01693 Caulimovirus viroplasmin PF04771 Chicken anaemia virus VP-3 protein PF01146 Caveolin PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family PF09672 Cytochrome c oxidase cbb3-type (Cbb3_Q_epsi) PF08406 CbbQ/NirQ/NorQ C-terminal PF03914 CBF/Mak21 family PF02312 Core binding factor beta subunit PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone PF08143 CBFNT (NUC161) domain PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PF02570 Precorrin-8X methylmutase PF01888 CbiD PF01890 CbiG PF02571 Precorrin-6x reductase CbiJ/CobK PF06180 Cobalt chelatase (CbiK) PF01891 CbiM PF02553 Cobalt transport protein component CbiN PF02361 Cobalt transport protein PF01903 CbiX PF01955 Adenosylcobinamide amidohydrolase PF02262 CBL proto-oncogene N-terminal domain 1 PF02761 CBL proto-oncogene N-terminus, EF hand-like domain PF02762 CBL proto-oncogene N-terminus, SH2-like domain PF07434 CblD like pilus biogenesis initiator PF09212 Carbohydrate binding module 27 PF09478 Carbohydrate binding domain CBM49 PF00734 Fungal cellulose binding domain PF02013 Cellulose or protein binding domain PF03425 Carbohydrate binding domain (family 11) PF01607 Chitin binding Peritrophin-A domain PF03426 Carbohydrate binding domain (family 15) PF03424 Carbohydrate binding domain (family 17/28) PF03427 Carbohydrate binding domain (family 19) PF00553 Cellulose binding domain PF00686 Starch binding domain PF03370 Putative phosphatase regulatory subunit PF03423 Carbohydrate binding domain (family 25) PF00942 Cellulose binding domain PF02018 Carbohydrate binding domain PF02839 Carbohydrate binding domain PF03422 Carbohydrate binding module (family 6) PF06204 Putative carbohydrate binding domain PF07960 CBP4 PF00571 CBS domain pair PF09490 Probable cobalt transporter subunit (CbtA) PF09489 Probable cobalt transporter subunit (CbtB) PF04942 CC domain PF07860 WisP family C-Terminal Region PF07362 Post-segregation antitoxin CcdA PF01845 CcdB protein PF02754 Cysteine-rich domain PF03379 CcmB protein PF04995 Heme exporter protein D (CcmD) PF03100 CcmE PF03918 Cytochrome C biogenesis protein PF03597 Cytochrome oxidase maturation protein cbb3-type PF03150 Di-haem cytochrome c peroxidase PF06203 CCT motif PF09425 Divergent CCT motif PF04103 CD20/IgE Fc receptor beta subunit family PF04505 Interferon-induced transmembrane protein PF06365 CD34/Podocalyxin family PF01130 CD36 family PF09191 CD4, extracellular PF04549 CD47 transmembrane region PF09283 CDC13, ssDNA binding PF08045 Cell division control protein 14, SIN component PF06395 CDC24 Calponin PF09507 DNA polymerase subunit Cdc27 PF08564 Cdc37 C terminal domain PF08565 Cdc37 Hsp90 binding domain PF03234 Cdc37 N terminal kinase binding PF02724 CDC45-like protein PF02933 Cell division protein 48 (CDC48), domain 2 PF02359 Cell division protein 48 (CDC48), N-terminal domain PF03381 LEM3 (ligand-effect modulator 3) family / CDC50 family PF09079 CDC6, C terminal PF05179 RNA pol II accessory factor, Cdc73 family PF02611 CDP-diacylglycerol pyrophosphatase PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit PF02234 Cyclin-dependent kinase inhibitor PF03261 Cyclin-dependent kinase 5 activator protein PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) PF05995 Cysteine dioxygenase type I PF08009 CDP-alcohol phosphatidyltransferase 2 PF01066 CDP-alcohol phosphatidyltransferase PF05174 Cysteine-rich D. radiodurans N terminus PF08839 DNA replication factor CDT1 like PF03498 Cytolethal distending toxin A/C family PF00272 Cecropin family PF02927 N-terminal ig-like domain of cellulase PF03500 Cellulose synthase subunit D PF00150 Cellulase (glycosyl hydrolase family 5) PF03552 Cellulose synthase PF03040 CemA family PF09026 Centromere protein B dimerisation domain PF04218 CENP-B N-terminal DNA-binding domain PF05837 Centromere protein H (CENP-H) PF09496 Cenp-O kinetochore centromere component PF09091 Centromere binding protein B, DNA binding PF09287 CEP-1, DNA binding PF04734 Neutral/alkaline non-lysosomal ceramidase PF07249 Cerato-platanin PF05932 Tir chaperone protein (CesT) PF05264 Choristoneura fumiferana antifreeze protein (CfAFP) PF09443 Cripto_Frl-1_Cryptic (CFC) PF05730 CFEM domain PF03859 CG-1 domain PF08821 CGGC domain PF08617 Kinase binding protein CGI-121 PF03879 Cgr1 family PF06306 Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) PF00307 Calponin homology (CH) domain PF06150 ChaB PF04752 ChaC-like protein PF05235 CHAD domain PF09394 Chagasin peptidase inhibitor I42 PF02797 Chalcone and stilbene synthases, C-terminal domain PF00195 Chalcone and stilbene synthases, N-terminal domain PF02431 Chalcone-flavanone isomerase PF03502 Nucleoside-specific channel-forming protein, Tsx PF05257 CHAP domain PF07824 Type III secretion chaperone domain PF09295 ChAPs (Chs5p-Arf1p-binding proteins) PF03924 CHASE domain PF05226 CHASE2 domain PF05227 CHASE3 domain PF05228 CHASE4 domain PF03173 Putative carbohydrate binding domain PF03174 Chitobiase/beta-hexosaminidase C-terminal domain PF06747 CHCH domain PF04420 CHD5-like protein PF08074 CHDCT2 (NUC038) domain PF08073 CHDNT (NUC034) domain PF01339 CheB methylesterase PF04509 CheC-like family PF03975 CheD PF01739 CheR methyltransferase, SAM binding domain PF03705 CheR methyltransferase, all-alpha domain PF01584 CheW-like domain PF09078 CheY binding PF04344 Chemotaxis phosphatase, CheZ PF05679 Chondroitin N-acetylgalactosaminyltransferase PF06483 Chitinase C PF00187 Chitin recognition protein PF03067 Chitin binding domain PF00379 Insect cuticle protein PF01644 Chitin synthase PF08407 Chitin synthase N-terminal PF03142 Chitin synthase PF08329 Chitinase A, N-terminal domain PF07335 Fungal chitosanase PF05238 Kinetochore protein CHL4 like PF01308 Chlamydia major outer membrane protein PF03503 Chlamydia cysteine-rich outer membrane protein 3 PF03504 Chlamydia cysteine-rich outer membrane protein 6 PF02415 Chlamydia polymorphic membrane protein (Chlamydia_PMP) PF05475 Chlamydia virulence protein PGP3-D PF07548 Chlamydia polymorphic membrane protein middle domain PF09675 Chlamydia-phage Chp2 scaffold (Chlamy_scaf) PF06778 Chlorite dismutase PF00504 Chlorophyll A-B binding protein PF07224 Chlorophyllase PF06598 Chlorovirus glycoprotein repeat PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PF09129 Cholesterol oxidase, substrate-binding PF09193 Cholecystokinin A receptor, N-terminal PF04428 Choline kinase N terminus PF01633 Choline/ethanolamine kinase PF06566 Chondroitin sulphate attachment domain PF04345 Chorismate lyase PF04968 CHORD PF05961 Chordopoxvirus A13L protein PF05846 Chordopoxvirus A15 protein PF05941 Chordopoxvirus A20R protein PF06015 Chordopoxvirus A30L protein PF05966 Chordopoxvirus A33R protein PF05989 Chordopoxvirus A35R protein PF06138 Chordopoxvirus E11 protein PF05796 Chordopoxvirus protein G2 PF06129 Chordopoxvirus G3 protein PF05803 Chordopoxvirus L2 protein PF05864 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) PF01723 Chorion protein PF03964 Chorion family 2 PF05387 Chorion family 3 PF05836 Chorion protein S16 PF00425 chorismate binding enzyme PF01264 Chorismate synthase PF09543 Protein of unknown function (CHP02267_MYXXA) PF09533 Predicted lipoprotein of unknown function (CHP02269_MYXXA) PF09539 Protein of unknown function (CHP02301) PF09541 Protein of unknown function (CHP02328) PF09508 Protein of unknown function (CHP02336) PF09526 Probable metal-binding protein (CHP02443) PF09523 Protein of unknown function (CHP02444) PF09498 Protein of unknown function (CHP02448) PF09493 Tryptophan-rich protein (CHP02450_Tryp) PF09365 Conserved hypothetical protein CHP02453 PF09616 Conserved protein of unknown function (CHP02569_actnb) PF09622 Putative integral membrane protein (CHP02587) PF09624 Protein of unknown function (CHP02588) PF09656 Putative transmembrane protein (CHP02611) PF09653 Protein of unknown function (CHP02647) PF09654 Protein of unknown function (CHP02652) PF09660 Protein of unknown function (CHP02677) PF09661 Protein of unknown function (CHP02678) PF09664 Protein of unknown function (CHP02679) PF09674 Protein of unknown function (CHP02757) PF09558 Protein of unknown function (CHP02922) PF09688 Protein of unknown function (CHP1606_PLAF3D7) PF09550 Conserved hypothetical phage protein (CHP2216_phage) PF09343 Conserved hypothetical protein 2217 PF09540 Putative phage tail protein (CHP2241_phage) PF09557 Domain of unknown function (CHP2271_C) PF09537 Protein of unknown function (CHP2284) PF09722 Protein of unknown function (CHP2293) PF09601 Protein of unknown function (Chp_urease_rgn) PF07452 CHRD domain PF05535 Chromadorea ALT protein PF02417 Chromate transporter PF00385 'chromo' (CHRromatin Organisation MOdifier) domain PF01393 Chromo shadow domain PF06573 Churchill protein PF07538 Clostridial hydrophobic W PF09649 Histone chaperone domain CHZ PF07347 NADH:ubiquinone oxidoreductase subunit B14.5a (Complex I-B14.5a) PF08547 Complex I intermediate-associated protein 30 (CIA30) PF02017 CIDE-N domain PF08134 cIII protein family PF00878 Cation-independent mannose-6-phosphate receptor repeat PF02464 Competence-damaged protein PF06022 Plasmodium variant antigen protein Cir/Yir/Bir PF04162 Circovirus coat protein (VP1) PF02443 Circovirus ORF-2 protein PF04861 Circovirus VP2 protein PF04953 Citrate lyase, gamma subunit PF04487 CITED PF04223 Citrate lyase, alpha subunit (CitF) PF01874 ATP:dephospho-CoA triphosphoribosyl transferase PF03600 Citrate transporter PF08218 Citrate lyase ligase C-terminal domain PF00285 Citrate synthase PF05520 Citrus tristeza virus P18 protein PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase PF01214 Casein kinase II regulatory subunit PF01111 Cyclin-dependent kinase regulatory subunit PF03805 Cytoadherence-linked asexual protein PF01217 Clathrin adaptor complex small chain PF00637 Region in Clathrin and VPS PF09268 Clathrin, heavy-chain linker PF01086 Clathrin light chain PF01394 Clathrin propeller repeat PF05452 Clavanin PF07062 Clc-like PF08434 Calcium-activated chloride channel PF07675 Cleaved Adhesin Domain PF03505 Clostridium enterotoxin PF02487 CLN3 protein PF03515 Cloacin PF03513 Cloacin immunity protein PF01785 Closterovirus coat protein PF06597 Clostridium P-47 protein PF06807 Pre-mRNA cleavage complex II protein Clp1 PF02861 Clp amino terminal domain PF00574 Clp protease PF02617 ATP-dependent Clp protease adaptor protein ClpS PF05602 Cleft lip and palate transmembrane protein 1 (CLPTM1) PF01093 Clusterin PF03026 Influenza C virus M1 protein PF03021 Influenza C virus M2 protein PF07736 Chorismate mutase type I PF01817 Chorismate mutase type II PF08077 Chloramphenicol resistance gene leader peptide PF02353 Cyclopropane-fatty-acyl-phospholipid synthase PF02543 Carbamoyltransferase PF04989 Cephalosporin hydroxylase PF02627 Carboxymuconolactone decarboxylase family PF08001 CMV US PF09316 C-myb, C-terminal PF00795 Carbon-nitrogen hydrolase PF05738 Cna protein B-type domain PF05785 Rho-activating domain of cytotoxic necrotizing factor PF00780 CNH domain PF09447 Cnl2/NKP2 family protein PF00027 Cyclic nucleotide-binding domain PF08750 CNP1-like family PF05881 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP or CNPase) PF01110 Ciliary neurotrophic factor PF03450 CO dehydrogenase flavoprotein C-terminal domain PF02552 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit PF02629 CoA binding domain PF01144 Coenzyme A transferase PF02515 CoA-transferase family III PF01121 Dephospho-CoA kinase PF08764 Staphylococcus aureus coagulase PF02035 Coagulin PF07875 Coat F domain PF07552 Spore Coat Protein X and V domain PF07718 Coatamer beta C-terminal region PF04733 Coatomer epsilon subunit PF04053 Coatomer WD associated region PF01923 Cobalamin adenosyltransferase PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PF01122 Eukaryotic cobalamin-binding protein PF03186 CobD/Cbib protein PF09469 Cordon-bleu domain PF02514 CobN/Magnesium Chelatase PF06209 Cofactor of BRCA1 (COBRA1) PF02654 Cobalamin-5-phosphate synthase PF06213 Cobalamin biosynthesis protein CobT PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PF02492 CobW/HypB/UreG, nucleotide-binding domain PF07683 Cobalamin synthesis protein cobW C-terminal domain PF06018 CodY GAF-like domain PF00135 Carboxylesterase PF00241 Cofilin/tropomyosin-type actin-binding protein PF06148 COG (conserved oligomeric Golgi) complex component, COG2 PF08318 COG4 transport protein PF06419 Conserved oligomeric complex COG6 PF00963 Cohesin domain PF06054 Competence protein CoiA-like family PF05710 Coiled coil PF01484 Nematode cuticle collagen N-terminal domain PF06286 Coleoptericin PF01410 Fibrillar collagen C-terminal domain PF01024 Colicin pore forming domain PF03857 Colicin immunity protein PF01320 Colicin immunity protein / pyocin immunity protein PF02674 Colicin V production protein PF09204 Colicin D PF01114 Colipase, N-terminal domain PF02740 Colipase, C-terminal domain PF01391 Collagen triple helix repeat (20 copies) PF05737 Collagen binding domain PF07484 Phage Tail Collar Domain PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) PF03047 COMC family PF06338 ComK protein PF02247 Large coat protein PF02248 Small coat protein PF03772 Competence protein PF01257 Respiratory-chain NADH dehydrogenase 24 Kd subunit PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PF05347 Complex 1 protein (LYR family) PF05952 Bacillus competence pheromone ComX PF00668 Condensation domain PF00029 Connexin PF03508 Gap junction alpha-1 protein (Cx43) PF03509 Gap junction alpha-8 protein (Cx50) PF02950 Conotoxin PF03601 Conserved hypothetical protein 698 PF03602 Conserved hypothetical protein 95 PF05275 Copper resistance protein B precursor (CopB) PF04234 Copper resistance protein CopC PF05425 Copper resistance protein D PF08507 COPI associated protein PF06957 Coatomer (COPI) alpha subunit C-terminus PF07002 Copine PF00127 Copper binding proteins, plastocyanin/azurin family PF00649 Copper fist DNA binding domain PF05920 Coprinus cinereus mating-type protein PF01218 Coproporphyrinogen III oxidase PF05019 Coenzyme Q (ubiquinone) biosynthesis protein Coq4 PF03232 Ubiquinone biosynthesis protein COQ7 PF08511 COQ9 PF04803 Cor1/Xlr/Xmr conserved region PF01544 CorA-like Mg2+ transporter protein PF03471 Transporter associated domain PF03311 Cornichon protein PF02389 Cornifin (SPRR) family PF04694 Coronavirus ORF3 protein PF06336 Coronavirus 5a protein PF03262 Coronavirus 6B/7B protein PF02398 Coronavirus protein 7 PF03187 Corona nucleocapsid I protein PF01635 Coronavirus M matrix/glycoprotein PF06145 Coronavirus nonstructural protein NS1 PF04753 Coronavirus non-structural protein NS2 PF05213 Coronavirus NS2A protein PF03053 ORF3b coronavirus protein PF03905 Coronavirus non-structural protein NS4 PF00937 Coronavirus nucleocapsid protein PF06478 Coronavirus RPol N-terminus PF01600 Coronavirus S1 glycoprotein PF01601 Coronavirus S2 glycoprotein PF05528 Coronavirus gene 5 protein PF05780 Coronavirus nonstructural protein 4 PF09304 Cortexillin I, coiled coil PF08757 CotH protein PF00115 Cytochrome C and Quinol oxidase polypeptide I PF02628 Cytochrome oxidase assembly protein PF05051 Cytochrome C oxidase copper chaperone (COX17) PF00116 Cytochrome C oxidase subunit II, periplasmic domain PF09125 Cytochrome C oxidase subunit II, transmembrane PF02790 Cytochrome C oxidase subunit II, transmembrane domain PF00510 Cytochrome c oxidase subunit III PF02936 Cytochrome c oxidase subunit IV PF03626 Prokaryotic Cytochrome C oxidase subunit IV PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV PF02284 Cytochrome c oxidase subunit Va PF01215 Cytochrome c oxidase subunit Vb PF05799 Cytochrome c oxidase subunit Vc (COX5C) PF02046 Cytochrome c oxidase subunit VIa PF02297 Cytochrome oxidase c subunit VIb PF02937 Cytochrome c oxidase subunit VIc PF02238 Cytochrome c oxidase subunit VIIa PF05392 Cytochrome C oxidase chain VIIB PF02935 Cytochrome c oxidase subunit VIIc PF02285 Cytochrome oxidase c subunit VIII PF09576 Cytochrome c oxidase subunit COX9 PF06481 COX Aromatic Rich Motif PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) PF08113 Cytochrome c oxidase subunit IIa family PF02672 CP12 domain PF04516 CP2 transcription factor PF01383 CpcD/allophycocyanin linker domain PF07823 Cyclic phosphodiesterase-like protein PF09367 CpeS-like protein PF08144 CPL (NUC119) domain PF08230 Cpl-7 lysozyme C-terminal domain PF00166 Chaperonin 10 Kd subunit PF00118 TCP-1/cpn60 chaperonin family PF05205 Chromatin remodelling complex component cps15 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PF03178 CPSF A subunit region PF07931 Chloramphenicol phosphotransferase-like protein PF09717 Plasmodium falciparum domain of unknown function (CPW_WPC) PF06589 Circumsporozoite-related antigen (CRA) PF07046 Cytoplasmic repetitive antigen (CRA) like repeat PF00650 CRAL/TRIO domain PF03765 CRAL/TRIO, N-terminus PF07016 Cysteine-rich, acidic integral membrane protein precursor (CRAM) repeat PF08624 Chromatin remodelling complex subunit PF02537 CrcB-like protein PF05981 CreA protein PF01321 Creatinase/Prolidase N-terminal domain PF02633 Creatinine amidohydrolase PF09030 Creb binding PF06123 Inner membrane protein CreD PF00473 Corticotropin-releasing factor family PF05428 Corticotropin-releasing factor binding protein (CRF-BP) PF07416 Crinivirus P26 protein PF08562 Crisp PF08798 CRISPR associated protein PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) PF07417 Transcriptional regulator Crl PF08767 CRM1 C terminal PF09048 Cro PF00325 Bacterial regulatory proteins, crp family PF05745 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) PF08762 CRPV capsid protein like PF01985 CRS1 / YhbY domain PF08627 CRT-like PF08728 CRT10 PF07143 Hydroxyneurosporene synthase (CrtC) PF03858 Crustacean neurohormone H PF01147 Crustacean CHH/MIH/GIH neurohormone family PF07029 CryBP1 protein PF00030 Beta/Gamma crystallin PF00525 Alpha crystallin A chain, N terminal PF04969 CS domain PF05532 CsbD-like PF00313 'Cold-shock' DNA-binding domain PF08506 Cse1 PF07544 RNA polymerase II transcription mediator PF05337 Macrophage colony stimulating factor-1 (CSF-1) PF03783 Curli production assembly/transport component CsgG PF08943 CsiD PF08936 Carboxysome Shell Carbonic Anhydrase PF02599 Global regulator protein family PF06002 Alpha-2,3-sialyltransferase (CST-I) PF02554 Carbon starvation protein CstA PF07904 CT20 family PF04442 Cytochrome c oxidase assembly protein CtaG / Cox11 PF09696 Ctf8 PF00859 CTF/NF-I family transcription modulation region PF06934 Fatty acid cis/trans isomerase (CTI) PF07863 Homologues of TraJ from Bacteroides conjugative transposon PF08347 N-terminal CTNNB1 binding PF06418 CTP synthase N-terminus PF01148 Cytidylyltransferase family PF01467 Cytidylyltransferase PF02348 Cytidylyltransferase PF04145 Ctr copper transporter family PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) PF06922 Citrus tristeza virus P13 protein PF04808 Citrus tristeza virus (CTV) P23 protein PF07184 Citrus tristeza virus P33 protein PF06706 Citrus tristeza virus 6-kDa protein PF07459 CTX phage RstB protein PF00394 Multicopper oxidase PF07731 Multicopper oxidase PF07732 Multicopper oxidase PF03712 Copper type II ascorbate-dependent monooxygenase, C-terminal domain PF01082 Copper type II ascorbate-dependent monooxygenase, N-terminal domain PF01179 Copper amine oxidase, enzyme domain PF07833 Copper amine oxidase N-terminal domain PF02727 Copper amine oxidase, N2 domain PF02728 Copper amine oxidase, N3 domain PF02298 Plastocyanin-like domain PF00431 CUB domain PF02408 CUB-like domain PF03263 Cucumovirus protein 2B PF00760 Cucumovirus coat protein PF02845 CUE domain PF00888 Cullin family PF00190 Cupin PF07883 Cupin domain PF05899 Protein of unknown function (DUF861) PF08007 Cupin superfamily protein PF06172 Cupin superfamily (DUF985) PF07012 Curlin associated repeat PF07325 Curtovirus V2 protein PF07436 Curtovirus V3 protein PF02376 CUT domain PF08559 Cut8 PF03091 CutA1 divalent ion tolerance protein PF03932 CutC family PF08140 Crustacean cuticle protein repeat PF08184 Cuticle protein 7 isoform family PF01083 Cutinase PF08881 CVNH domain PF01473 Putative cell wall binding repeat PF04122 Putative cell wall binding repeat 2 PF08315 cwf18 pre-mRNA splicing factor PF08312 cwf21 PF04889 Cwf15/Cwc15 cell cycle control protein PF04677 Protein similar to CwfJ C-terminus 1 PF04676 Protein similar to CwfJ C-terminus 2 PF01705 CX module PF03638 Tesmin/TSO1-like CXC domain PF03128 CXCXC repeat PF09723 Putative regulatory protein (CxxC_CxxC_SSSS) PF02560 Cyanate lyase C-terminal domain PF05328 CybS PF09087 Cyclomaltodextrinase, N-terminal PF04199 Putative cyclase PF04673 Polyketide synthesis cyclase PF08613 Cyclin PF02984 Cyclin, C-terminal domain PF00134 Cyclin, N-terminal domain PF03784 Cyclotide family PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) PF05865 Cypovirus polyhedrin protein PF00007 Cystine-knot domain PF01053 Cys/Met metabolism PLP-dependent enzyme PF00839 Cysteine rich repeat PF00031 Cystatin domain PF00173 Cytochrome b5-like Heme/Steroid binding domain PF07271 Cytadhesin P30/P32 PF08802 Cytochrome B6-F complex Fe-S subunit PF01928 CYTH domain PF02224 Cytidylate kinase PF01265 Cytochrome c/c1 heme lyase PF02322 Cytochrome oxidase subunit II PF02276 Photosynthetic reaction centre cytochrome C subunit PF05038 Cytochrome Cytochrome b558 alpha-subunit PF00283 Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits PF00284 Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit PF03188 Cytochrome b561 PF07361 Cytochrome b562 PF00032 Cytochrome b(C-terminal)/b6/petD PF00033 Cytochrome b(N-terminal)/b6/petB PF00034 Cytochrome c PF02167 Cytochrome C1 family PF02335 Cytochrome c552 PF01322 Cytochrome C' PF01578 Cytochrome C assembly protein PF02085 Class III cytochrome C family PF02239 Cytochrome D1 heme domain PF03264 NapC/NirT cytochrome c family, N-terminal region PF09265 Cytokinin dehydrogenase 1, FAD and cytokinin binding PF01801 Cytomegalovirus glycoprotein L PF06084 Cytomegalovirus TRL10 protein PF05984 Cytomegalovirus UL20A protein PF06284 Cytomegalovirus UL84 protein PF05963 Cytomegalovirus US3 protein PF09000 Cytotoxic PF07908 D-aminoacylase, C-terminal region PF07065 D123 PF08706 D5 N terminal like PF07876 Stress responsive A/B Barrel Domain PF02109 DAD family PF05454 Dystroglycan (Dystrophin-associated glycoprotein 1) PF03982 Diacylglycerol acyltransferase PF00609 Diacylglycerol kinase accessory domain PF00781 Diacylglycerol kinase catalytic domain (presumed) PF01219 Prokaryotic diacylglycerol kinase PF00793 DAHP synthetase I family PF01474 Class-II DAHP synthetase family PF02733 Dak1 domain PF02734 DAK2 domain PF07478 D-ala D-ala ligase C-terminus PF01820 D-ala D-ala ligase N-terminus PF05746 DALR anticodon binding domain PF09190 DALR domain PF05869 DNA N-6-adenine-methyltransferase (Dam) PF03045 DAN domain PF01266 FAD dependent oxidoreductase PF07213 DAP10 membrane protein PF07930 D-aminopeptidase, domain B PF07932 D-aminopeptidase, domain C PF01678 Diaminopimelate epimerase PF05173 Dihydrodipicolinate reductase, C-terminus PF01113 Dihydrodipicolinate reductase, N-terminus PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal PF05395 Protein phosphatase inhibitor 1/DARPP-32 PF08655 DASH complex subunit Ask1 PF08649 DASH complex subunit Dad1 PF08654 DASH complex subunit Dad2 PF08656 DASH complex subunit Dad3 PF08650 DASH complex subunit Dad4 PF08653 DASH complex subunit Dam1 PF08651 DASH complex subunit Duo1 PF08227 DASH complex subunit Hsk3 like PF08287 Spc19 PF08657 DASH complex subunit Spc34 PF03344 Daxx Family PF01682 DB module PF02277 Phosphoribosyltransferase PF08147 DBP10CT (NUC160) domain PF03880 DbpA RNA binding domain PF05011 Lariat debranching enzyme, C-terminal domain PF07782 DC-STAMP-like protein PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region PF06058 Dcp1-like decapping family PF05026 Dcp2, box A domain PF05652 Scavenger mRNA decapping enzyme (DcpS) PF06808 DctM-like transporters PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PF03605 Anaerobic c4-dicarboxylate membrane transporter PF03606 C4-dicarboxylate anaerobic carrier PF03607 Doublecortin PF03184 DDE superfamily endonuclease PF03455 dDENN domain PF02862 DDHD domain PF03345 Dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kD subunit PF08841 Diol dehydratase / glycerol dehydratase reactivase large subunit PF02791 DDT domain PF00270 DEAD/DEAH box helicase PF06733 DEAD_2 PF08494 DEAD/H associated PF00531 Death domain PF04624 Dec-1 repeat PF04626 Dec-1 protein, C terminal region PF04625 DEC-1 protein, N terminal region PF02352 Decorin binding protein PF01335 Death effector domain PF06920 Dedicator of cytokinesis PF00323 Mammalian defensin PF01097 Arthropod defensin PF08131 Defensin-like peptide family PF00711 Beta defensin PF00879 Defensin propeptide PF08181 DegQ (SacQ) family PF05384 Sensor protein DegS PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PF02645 Uncharacterised protein, DegV family COG1307 PF09098 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding PF02286 Dehydratase large subunit PF02288 Dehydratase medium subunit PF02287 Dehydratase small subunit PF00257 Dehydrin PF08766 DEK C terminal domain PF05372 Delta lysin family PF05599 Deltaretrovirus Tax protein PF02141 DENN (AEX-3) domain PF02336 Capsid protein VP4 PF01791 DeoC/LacD family aldolase PF00455 Bacterial regulatory proteins, deoR family PF00610 Domain found in Dishevelled, Egl-10, and Pleckstrin PF04511 Der1-like family PF06771 Viral Desmoplakin N-terminus PF05497 Destabilase PF06397 Desulfoferrodoxin, N-terminal domain PF01880 Desulfoferrodoxin PF09532 DFDF motif PF09033 DNA Fragmentation factor 45kDa, C terminal domain PF09230 DNA fragmentation factor 40 kDa PF04127 DNA / pantothenate metabolism flavoprotein PF08630 Dfp1/Him1, central region PF08859 DGC domain PF07324 DiGeorge syndrome critical region 6 (DGCR6) protein PF05035 2-keto-3-deoxy-galactonokinase PF04946 DGPF domain PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PF09626 Dihaem cytochrome c PF08385 Dynein heavy chain, N-terminal region 1 PF08393 Dynein heavy chain, N-terminal region 2 PF00701 Dihydrodipicolinate synthetase family PF00186 Dihydrofolate reductase PF06442 R67 dihydrofolate reductase PF01368 DHH family PF02272 DHHA1 domain PF02833 DHHA2 domain PF01180 Dihydroorotate dehydrogenase PF01761 3-dehydroquinate synthase PF01959 3-dehydroquinate synthase (EC 4.6.1.3) PF01487 Type I 3-dehydroquinase PF01220 Dehydroquinase class II PF05605 Drought induced 19 protein (Di19) PF05651 Putative sugar diacid recognition PF05358 DicB protein PF04706 Dickkopf N-terminal cysteine-rich region PF09267 Dictyostelium STAT, coiled coil PF05720 Cell-cell adhesion domain PF05462 Slime mold cyclic AMP receptor PF00526 Dictyostelium (slime mold) repeat PF05086 Dictyostelium (Slime Mold) REP protein PF04562 Dictyostelium spore coat protein, N terminus PF04922 DIE2/ALG10 family PF01843 DIL domain PF08194 DIM protein PF02966 Mitosis protein DIM1 PF08100 Dimerisation domain PF09505 Dimethylamine methyltransferase (Dimeth_PyL) PF05163 DinB family PF06183 DinI-like family PF00775 Dioxygenase PF04444 Catechol dioxygenase N terminus PF01866 Putative diphthamide synthesis protein PF02763 Diphtheria toxin, C domain PF01324 Diphtheria toxin, R domain PF02764 Diphtheria toxin, T domain PF08431 DIPSY PF03018 Dirigent-like protein PF06584 DIRP PF06750 Bacterial Peptidase A24 N-terminal domain PF08480 Disaggregatase related PF06848 Disaggregatase related repeat PF02377 Dishevelled specific domain PF00200 Disintegrin PF05141 Pyoverdine/dityrosine biosynthesis protein PF04977 Septum formation initiator PF05103 DivIVA protein PF00778 DIX domain PF01965 DJ-1/PfpI family PF08068 DKCLD (NUC011) domain PF01738 Dienelactone hydrolase family PF05783 Dynein light intermediate chain (DLIC) PF04914 DltD C-terminal region PF04918 DltD central region PF04915 DltD N-terminal region PF00751 DM DNA binding domain PF07841 DM4/DM12 family PF03474 DMRTA motif PF05499 DNA methyltransferase 1-associated protein 1 (DMAP1) PF06464 DMAP1-binding Domain PF07263 Dentin matrix protein 1 (DMP1) PF07836 DmpG-like communication domain PF08826 DMPK coiled coil domain like PF00885 6,7-dimethyl-8-ribityllumazine synthase PF04976 DMSO reductase anchor subunit (DmsC) PF08696 DNA replication factor Dna2 PF08713 DNA alkylation repair enzyme PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PF07157 DNA circulation protein N-terminus PF03989 DNA gyrase C-terminal domain, beta-propeller PF00204 DNA gyrase B PF00986 DNA gyrase B subunit, carboxyl terminus PF03603 DNA polymerase III psi subunit PF04679 ATP dependent DNA ligase C terminal region PF01068 ATP dependent DNA ligase domain PF04675 DNA ligase N terminus PF01653 NAD-dependent DNA ligase adenylation domain PF03120 NAD-dependent DNA ligase OB-fold domain PF03119 NAD-dependent DNA ligase C4 zinc finger domain PF00145 C-5 cytosine-specific DNA methylase PF01119 DNA mismatch repair protein, C-terminal domain PF02499 Probable DNA packing protein, C-terminus PF02500 Probable DNA packing protein, N-terminus PF00875 DNA photolyase PF07733 Bacterial DNA polymerase III alpha subunit PF00712 DNA polymerase III beta subunit, N-terminal domain PF02767 DNA polymerase III beta subunit, central domain PF02768 DNA polymerase III beta subunit, C-terminal domain PF04364 DNA polymerase III chi subunit, HolC PF06144 DNA polymerase III, delta subunit PF06440 DNA polymerase III, theta subunit PF00476 DNA polymerase family A PF00136 DNA polymerase family B PF03175 DNA polymerase type B, organellar and viral PF08408 DNA polymerase family B viral insert PF03104 DNA polymerase family B, exonuclease domain PF04081 DNA polymerase delta, subunit 4 PF04042 DNA polymerase alpha/epsilon subunit B PF04931 DNA polymerase phi PF00336 DNA polymerase (viral) C-terminal domain PF00242 DNA polymerase (viral) N-terminal domain PF02916 DNA polymerase processivity factor PF04104 Eukaryotic and archaeal DNA primase, large subunit PF01896 Eukaryotic and archaeal DNA primase small subunit PF03604 DNA directed RNA polymerase, 7 kDa subunit PF00521 DNA gyrase/topoisomerase IV, subunit A PF00772 DnaB-like helicase N terminal domain PF07261 Replication initiation and membrane attachment protein (DnaB) PF03796 DnaB-like helicase C terminal domain PF04271 DnaD-like domain PF08278 DNA primase DnaG DnaB-binding PF07319 Primosomal protein DnaI N-terminus PF00226 DnaJ domain PF01556 DnaJ C terminal region PF00684 DnaJ central domain (4 repeats) PF08452 DNA polymerase family B exonuclease domain, N-terminal PF09115 DNA polymerase III, delta subunit, C terminal PF03265 Deoxyribonuclease II PF01712 Deoxynucleoside kinase PF05012 Prophage maintenance system killer protein PF00404 Dockerin type I repeat PF08990 Erythronolide synthase docking PF03351 DOMON domain PF08883 Dopa 4,5-dioxygenase family PF04118 Dopey, N-terminal PF04124 Dor1-like family PF08123 Histone methylation protein DOT1 PF09475 Dot/Icm secretion system protein (dot_icm_IcmQ) PF07680 TQO small subunit DoxA PF04173 TQO small subunit DoxD PF07681 DoxX PF08781 Transcription factor DP PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PF07297 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) PF08285 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) PF04556 DpmII restriction endonuclease PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region PF04244 Deoxyribodipyrimidine photolyase-related protein PF05186 Dpy-30 motif PF07357 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) PF05558 DREPP plasma membrane polypeptide PF05219 DREV methyltransferase PF06345 DRF Autoregulatory Domain PF06346 Formin Homology Region 1 PF06367 Diaphanous FH3 Domain PF06371 Diaphanous GTPase-binding Domain PF07539 Down-regulated in metastasis PF07522 DNA repair metallo-beta-lactamase PF06044 Dam-replacing family PF02635 DsrE/DsrF-like family PF07085 DRTGG domain PF01916 Deoxyhypusine synthase PF01323 DSBA-like thioredoxin domain PF02600 Disulfide bond formation protein DsbB PF02683 Cytochrome C biogenesis protein transmembrane region PF01984 Double-stranded DNA-binding domain PF08148 DSHCT (NUC185) domain PF01414 Delta serrate ligand PF08505 DSL1 PF00782 Dual specificity phosphatase, catalytic domain PF06704 DspF/AvrF protein PF04358 DsrC like protein PF08679 Dissimilatory sulfite reductase D (DsrD) PF04077 DsrH like protein PF00035 Double-stranded RNA binding motif PF03368 Double stranded RNA binding domain PF05160 DSS1/SEM1 family PF08828 Doublesex dimerisation domain PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PF08070 DTHCT (NUC029) region PF03942 DTW domain PF06201 Domain of Unknown Function (DUF1000) PF06206 Protein of unknown function (DUF1001) PF06207 Protein of unknown function (DUF1002) PF06210 Protein of unknown function (DUF1003) PF06217 GAGA binding protein-like family PF06219 Protein of unknown function (DUF1005) PF06224 Protein of unknown function (DUF1006) PF06226 Protein of unknown function (DUF1007) PF06228 Protein of unknown function (DUF1008) PF06230 Protein of unknown function (DUF1009) PF01951 Protein of unknown function DUF101 PF06231 Protein of unknown function (DUF1010) PF06237 Protein of unknown function (DUF1011) PF06241 Protein of unknown function (DUF1012) PF06242 Protein of unknown function (DUF1013) PF06244 Protein of unknown function (DUF1014) PF06245 Protein of unknown function (DUF1015) PF06250 Protein of unknown function (DUF1016) PF06251 Protein of unknown function (DUF1017) PF06252 Protein of unknown function (DUF1018) PF06254 Protein of unknown function (DUF1019) PF06255 Protein of unknown function (DUF1020) PF06257 Protein of unknown function (DUF1021) PF06258 Protein of unknown function (DUF1022) PF06259 Alpha/beta hydrolase of unknown function (DUF1023) PF06260 Protein of unknown function (DUF1024) PF06262 Domain of unknown function (DUF1025) PF06264 Protein of unknown function (DUF1026) PF06265 Protein of unknown function (DUF1027) PF06267 Family of unknown function (DUF1028) PF06269 Protein of unknown function (DUF1029) PF06270 Protein of unknown function (DUF1030) PF06275 Protein of unknown function (DUF1031) PF06278 Protein of unknown function (DUF1032) PF06279 Protein of unknown function (DUF1033) PF06280 Domain of Unknown Function (DUF1034) PF06281 Protein of unknown function (DUF1035) PF06282 Protein of unknown function (DUF1036) PF06283 Protein of unknown function (DUF1037) PF06285 Protein of unknown function (DUF1038) PF06287 Protein of unknown function (DUF1039) PF01954 Protein of unknown function DUF104 PF06288 Protein of unknown function (DUF1040) PF06292 Domain of Unknown Function (DUF1041) PF06294 Domain of Unknown Function (DUF1042) PF06295 Protein of unknown function (DUF1043) PF06296 Protein of unknown function (DUF1044) PF06299 Protein of unknown function (DUF1045) PF06303 Protein of unknown function (DUF1047) PF06304 Protein of unknown function (DUF1048) PF06305 Protein of unknown function (DUF1049) PF06319 Protein of unknown function (DUF1052) PF06327 Domain of Unknown Function (DUF1053) PF06335 Protein of unknown function (DUF1054) PF06337 Domain of Unknown Function (DUF1055) PF06341 Protein of unknown function (DUF1056) PF06342 Alpha/beta hydrolase of unknown function (DUF1057) PF06348 Protein of unknown function (DUF1059) PF01956 Integral membrane protein DUF106 PF06352 Protein of unknown function (DUF1061) PF06353 Protein of unknown function (DUF1062) PF06354 Protein of unknown function (DUF1063) PF06356 Protein of unknown function (DUF1064) PF06358 Protein of unknown function (DUF1065) PF06359 Protein of unknown function (DUF1066) PF06362 Protein of unknown function (DUF1067) PF06364 Protein of unknown function (DUF1068) PF06370 Protein of unknown function (DUF1069) PF06376 Protein of unknown function (DUF1070) PF06378 Protein of unknown function (DUF1071) PF06380 Protein of unknown function (DUF1072) PF06381 Protein of unknown function (DUF1073) PF06382 Protein of unknown function (DUF1074) PF06388 Protein of unknown function (DUF1075) PF06416 Protein of unknown function (DUF1076) PF06417 Protein of unknown function (DUF1077) PF06429 Domain of unknown function (DUF1078) PF06435 Repeat of unknown function (DUF1079) PF01958 Domain of unknown function DUF108 PF06439 Domain of Unknown Function (DUF1080) PF06448 Domain of Unknown Function (DUF1081) PF06449 Mitochondrial domain of unknown function (DUF1082) PF06452 Domain of unknown function (DUF1083) PF06454 Protein of unknown function (DUF1084) PF06461 Domain of Unknown Function (DUF1086) PF06465 Domain of Unknown Function (DUF1087) PF06469 Domain of Unknown Function (DUF1088) PF06475 Protein of unknown function (DUF1089) PF06476 Protein of unknown function (DUF1090) PF06477 Protein of unknown function (DUF1091) PF06485 Protein of unknown function (DUF1092) PF06486 Protein of unknown function (DUF1093) PF06491 Protein of unknown function (DUF1094) PF06493 Protein of unknown function (DUF1096) PF06496 Protein of unknown function (DUF1097) PF06497 Protein of unknown function (DUF1098) PF01345 Domain of unknown function DUF11 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) PF06503 Protein of unknown function (DUF1101) PF06510 Protein of unknown function (DUF1102) PF06513 Repeat of unknown function (DUF1103) PF06518 Protein of unknown function (DUF1104) PF06520 Protein of unknown function (DUF1105) PF06523 Protein of unknown function (DUF1106) PF06526 Protein of unknown function (DUF1107) PF06531 Protein of unknown function (DUF1108) PF06532 Protein of unknown function (DUF1109) PF01969 Protein of unknown function DUF111 PF06533 Protein of unknown function (DUF1110) PF06537 Protein of unknown function (DUF1111) PF06539 Protein of unknown function (DUF1112) PF06541 Protein of unknown function (DUF1113) PF06542 Protein of unknown function (DUF1114) PF06544 Protein of unknown function (DUF1115) PF06545 Protein of unknown function (DUF1116) PF06547 Protein of unknown function (DUF1117) PF06549 Protein of unknown function (DUF1118) PF06550 Protein of unknown function (DUF1119) PF01970 Integral membrane protein DUF112 PF06551 Protein of unknown function (DUF1120) PF06555 Protein of unknown function (DUF1121) PF06557 Protein of unknown function (DUF1122) PF06561 Protein of unknown function (DUF1123) PF06563 Protein of unknown function (DUF1125) PF06565 Repeat of unknown function (DUF1126) PF06568 Domain of unknown function (DUF1127) PF06569 Protein of unknown function (DUF1128) PF06570 Protein of unknown function (DUF1129) PF06571 Protein of unknown function (DUF1130) PF06572 Protein of unknown function (DUF1131) PF06575 Protein of unknown function (DUF1132) PF06576 Protein of unknown function (DUF1133) PF06577 Protein of unknown function (DUF1134) PF06581 Protein of unknown function (DUF1135) PF06582 Repeat of unknown function (DUF1136) PF06587 Protein of unknown function (DUF1137) PF06592 Protein of unknown function (DUF1138) PF06599 Protein of unknown function (DUF1139) PF01972 Protein of unknown function DUF114 PF06600 Protein of unknown function (DUF1140) PF06603 Protein of unknown function (DUF1141) PF06605 Protein of unknown function (DUF1142) PF06608 Protein of unknown function (DUF1143) PF06610 Protein of unknown function (DUF1144) PF06611 Protein of unknown function (DUF1145) PF06612 Protein of unknown function (DUF1146) PF06615 Protein of unknown function (DUF1147) PF06618 Protein of unknown function (DUF1148) PF06619 Protein of unknown function (DUF1149) PF01973 Protein of unknown function DUF115 PF06620 Protein of unknown function (DUF1150) PF06625 Protein of unknown function (DUF1151) PF06626 Protein of unknown function (DUF1152) PF06627 Protein of unknown function (DUF1153) PF06631 Protein of unknown function (DUF1154) PF06633 Protein of unknown function (DUF1155) PF06634 Protein of unknown function (DUF1156) PF06636 Protein of unknown function (DUF1157) PF06643 Protein of unknown function (DUF1158) PF06647 Protein of unknown function (DUF1159) PF01976 Protein of unknown function DUF116 PF06648 Protein of unknown function (DUF1160) PF06649 Protein of unknown function (DUF1161) PF06650 Protein of unknown function (DUF1162) PF06651 Protein of unknown function (DUF1163) PF06653 Protein of unknown function (DUF1164) PF06654 Protein of unknown function (DUF1165) PF06657 Protein of unknown function (DUF1167) PF06658 Protein of unknown function (DUF1168) PF06663 Protein of unknown function (DUF1170) PF06664 Protein of unknown function (DUF1171) PF06665 Protein of unknown function (DUF1172) PF06666 Protein of unknown function (DUF1173) PF06671 Repeat of unknown function (DUF1174) PF06672 Protein of unknown function (DUF1175) PF06674 Protein of unknown function (DUF1176) PF06675 Protein of unknown function (DUF1177) PF06676 Protein of unknown function (DUF1178) PF06678 Protein of unknown function (DUF1179) PF06679 Protein of unknown function (DUF1180) PF06680 Protein of unknown function (DUF1181) PF06681 Protein of unknown function (DUF1182) PF06682 Protein of unknown function (DUF1183) PF06683 Protein of unknown function (DUF1184) PF06684 Protein of unknown function (DUF1185) PF06685 Protein of unknown function (DUF1186) PF06688 Protein of unknown function (DUF1187) PF06690 Protein of unknown function (DUF1188) PF06691 Protein of unknown function (DUF1189) PF06693 Protein of unknown function (DUF1190) PF06697 Protein of unknown function (DUF1191) PF06698 Protein of unknown function (DUF1192) PF06702 Protein of unknown function (DUF1193) PF06707 Protein of unknown function (DUF1194) PF06708 Protein of unknown function (DUF1195) PF06709 Protein of unknown function (DUF1196) PF06710 Protein of unknown function (DUF1197) PF06711 Protein of unknown function (DUF1198) PF06712 Protein of unknown function (DUF1199) PF01982 Domain of unknown function DUF120 PF06713 Protein of unknown function (DUF1200) PF06716 Protein of unknown function (DUF1201) PF06717 Protein of unknown function (DUF1202) PF06718 Protein of unknown function (DUF1203) PF06721 Protein of unknown function (DUF1204) PF06722 Protein of unknown function (DUF1205) PF06724 Domain of Unknown Function (DUF1206) PF06727 Protein of unknown function (DUF1207) PF06730 Protein of unknown function (DUF1208) PF01983 Protein of unknown function DUF121 PF06735 Protein of unknown function (DUF1210) PF06736 Protein of unknown function (DUF1211) PF06738 Protein of unknown function (DUF1212) PF06740 Protein of unknown function (DUF1213) PF06742 Protein of unknown function (DUF1214) PF06744 Protein of unknown function (DUF1215) PF06746 Protein of unknown function (DUF1216) PF06748 Protein of unknown function (DUF1217) PF06749 Protein of unknown function (DUF1218) PF06755 Protein of unknown function (DUF1219) PF06758 Repeat of unknown function (DUF1220) PF06760 Protein of unknown function (DUF1221) PF06762 Protein of unknown function (DUF1222) PF06764 Protein of unknown function (DUF1223) PF06774 Protein of unknown function (DUF1225) PF06777 Protein of unknown function (DUF1227) PF06779 Protein of unknown function (DUF1228) PF06797 Protein of unknown function (DUF1229) PF01986 Domain of unknown function DUF123 PF06799 Protein of unknown function (DUF1230) PF06802 Protein of unknown function (DUF1231) PF06803 Protein of unknown function (DUF1232) PF06806 Putative excisionase (DUF1233) PF06821 Alpha/Beta hydrolase family of unknown function (DUF1234) PF06822 Protein of unknown function (DUF1235) PF06823 Protein of unknown function (DUF1236) PF06824 Protein of unknown function (DUF1237) PF06829 Protein of unknown function (DUF1238) PF06835 Protein of unknown function (DUF1239) PF01987 Protein of unknown function DUF124 PF06836 Protein of unknown function (DUF1240) PF06840 Protein of unknown function (DUF1241) PF06842 Protein of unknown function (DUF1242) PF06844 Protein of unknown function (DUF1244) PF06846 Protein of unknown function (DUF1245) PF06849 Protein of unknown function (DUF1246) PF06851 Protein of unknown function (DUF1247) PF06852 Protein of unknown function (DUF1248) PF06853 Protein of unknown function (DUF1249) PF01988 Integral membrane protein DUF125 PF06855 Protein of unknown function (DUF1250) PF06856 Protein of unknown function (DUF1251) PF06860 Protein of unknown function (DUF1252) PF06862 Protein of unknown function (DUF1253) PF06863 Protein of unknown function (DUF1254) PF06865 Protein of unknown function (DUF1255) PF06866 Protein of unknown function (DUF1256) PF06868 Protein of unknown function (DUF1257) PF06869 Protein of unknown function (DUF1258) PF01989 Protein of unknown function DUF126 PF06877 Protein of unknown function (DUF1260) PF06879 Protein of unknown function (DUF1261) PF06880 Protein of unknown function (DUF1262) PF06882 Protein of unknown function (DUF1263) PF06884 Protein of unknown function (DUF1264) PF06887 Protein of unknown function (DUF1265) PF06889 Protein of unknown function (DUF1266) PF06895 Protein of unknown function (DUF1267) PF06896 Protein of unknown function (DUF1268) PF06897 Protein of unknown function (DUF1269) PF01994 Protein of unknown function DUF127 PF06900 Protein of unknown function (DUF1270) PF06902 Protein of unknown function (DUF1271) PF06906 Protein of unknown function (DUF1272) PF06908 Protein of unknown function (DUF1273) PF06909 Protein of unknown function (DUF1274) PF06912 Protein of unknown function (DUF1275) PF06914 Protein of unknown function (DUF1277) PF06915 Protein of unknown function (DUF1278) PF06916 Protein of unknown function (DUF1279) PF01995 Domain of unknown function DUF128 PF06918 Protein of unknown function (DUF1280) PF06924 Protein of unknown function (DUF1281) PF06930 Protein of unknown function (DUF1282) PF06932 Protein of unknown function (DUF1283) PF06935 Protein of unknown function (DUF1284) PF06938 Protein of unknown function (DUF1285) PF06939 Protein of unknown function (DUF1286) PF06940 Protein of unknown function (DUF1287) PF06944 Protein of unknown function (DUF1288) PF06945 Protein of unknown function (DUF1289) PF06947 Protein of unknown function (DUF1290) PF06948 Protein of unknown function (DUF1291) PF06949 Protein of unknown function (DUF1292) PF06950 Protein of unknown function (DUF1293) PF06961 Protein of unknown function (DUF1294) PF06966 Protein of unknown function (DUF1295) PF06972 Protein of unknown function (DUF1296) PF06973 Protein of unknown function (DUF1297) PF06974 Protein of unknown function (DUF1298) PF06975 Protein of unknown function (DUF1299) PF01482 Domain of unknown function DUF13 PF02343 Domain of unknown function DUF130 PF06976 Protein of unknown function (DUF1300) PF06979 Protein of unknown function (DUF1301) PF06980 Protein of unknown function (DUF1302) PF06987 Protein of unknown function (DUF1303) PF06993 Protein of unknown function (DUF1304) PF06996 Protein of unknown function (DUF1305) PF06997 Protein of unknown function (DUF1306) PF06998 Protein of unknown function (DUF1307) PF07000 Protein of unknown function (DUF1308) PF07004 Protein of unknown function (DUF1309) PF01998 Protein of unknown function DUF131 PF07006 Protein of unknown function (DUF1310) PF07007 Protein of unknown function (DUF1311) PF07009 Protein of unknown function (DUF1312) PF07011 Protein of unknown function (DUF1313) PF07013 Protein of unknown function (DUF1314) PF07023 Protein of unknown function (DUF1315) PF07026 Protein of unknown function (DUF1317) PF07027 Protein of unknown function (DUF1318) PF07028 Protein of unknown function (DUF1319) PF07030 Protein of unknown function (DUF1320) PF07031 Protein of unknown function (DUF1321) PF07032 Protein of unknown function (DUF1322) PF07037 Protein of unknown function (DUF1323) PF07038 Protein of unknown function (DUF1324) PF07039 Protein of unknown function (DUF1325) PF07040 Protein of unknown function (DUF1326) PF07041 Protein of unknown function (DUF1327) PF07043 Protein of unknown function (DUF1328) PF07044 Protein of unknown function (DUF1329) PF07045 Protein of unknown function (DUF1330) PF07048 Protein of unknown function (DUF1331) PF07049 Protein of unknown function (DUF1332) PF07050 Protein of unknown function (DUF1333) PF07056 Protein of unknown function (DUF1335) PF07059 Protein of unknown function (DUF1336) PF07063 Protein of unknown function (DUF1338) PF02001 Protein of unknown function DUF134 PF07067 Protein of unknown function (DUF1340) PF07071 Protein of unknown function (DUF1341) PF07072 Protein of unknown function (DUF1342) PF07075 Protein of unknown function (DUF1343) PF07076 Protein of unknown function (DUF1344) PF07077 Protein of unknown function (DUF1345) PF07079 Protein of unknown function (DUF1347) PF07080 Protein of unknown function (DUF1348) PF07081 Protein of unknown function (DUF1349) PF07082 Protein of unknown function (DUF1350) PF07083 Protein of unknown function (DUF1351) PF07086 Protein of unknown function (DUF1352) PF07087 Protein of unknown function (DUF1353) PF07090 Protein of unknown function (DUF1355) PF07092 Protein of unknown function (DUF1356) PF07094 Protein of unknown function (DUF1357) PF07096 Protein of unknown function (DUF1358) PF07097 Protein of unknown function (DUF1359) PF07098 Protein of unknown function (DUF1360) PF07099 Protein of unknown function (DUF1361) PF07100 Protein of unknown function (DUF1362) PF07101 Protein of unknown function (DUF1363) PF07102 Protein of unknown function (DUF1364) PF07103 Protein of unknown function (DUF1365) PF07104 Protein of unknown function (DUF1366) PF07105 Protein of unknown function (DUF1367) PF07112 Protein of unknown function (DUF1368) PF02006 Protein of unknown function DUF137 PF07114 Protein of unknown function (DUF1370) PF07115 Protein of unknown function (DUF1371) PF07116 Protein of unknown function (DUF1372) PF07117 Protein of unknown function (DUF1373) PF07118 Protein of unknown function (DUF1374) PF07119 Protein of unknown function (DUF1375) PF07120 Protein of unknown function (DUF1376) PF07125 Protein of unknown function (DUF1378) PF07126 Protein of unknown function (DUF1379) PF07128 Protein of unknown function (DUF1380) PF07129 Protein of unknown function (DUF1381) PF07131 Protein of unknown function (DUF1382) PF07134 Protein of unknown function (DUF1383) PF07135 Protein of unknown function (DUF1384) PF07136 Protein of unknown function (DUF1385) PF07138 Protein of unknown function (DUF1386) PF07139 Protein of unknown function (DUF1387) PF07142 Repeat of unknown function (DUF1388) PF07146 Protein of unknown function (DUF1389) PF07150 Protein of unknown function (DUF1390) PF07151 Protein of unknown function (DUF1391) PF07154 Protein of unknown function (DUF1392) PF07155 Protein of unknown function (DUF1393) PF07159 Protein of unknown function (DUF1394) PF07160 Protein of unknown function (DUF1395) PF07161 Protein of unknown function (DUF1396) PF07165 Protein of unknown function (DUF1397) PF07166 Protein of unknown function (DUF1398) PF07173 Protein of unknown function (DUF1399) PF02405 Domain of unknown function DUF140 PF07176 Alpha/beta hydrolase of unknown function (DUF1400) PF07180 Protein of unknown function (DUF1401) PF07182 Protein of unknown function (DUF1402) PF07183 Protein of unknown function (DUF1403) PF07185 Protein of unknown function (DUF1404) PF07187 Protein of unknown function (DUF1405) PF07190 Protein of unknown function (DUF1406) PF07191 Protein of unknown function (DUF1407) PF07193 Protein of unknown function (DUF1408) PF07197 Protein of unknown function (DUF1409) PF07198 Protein of unknown function (DUF1410) PF07199 Protein of unknown function (DUF1411) PF07203 Protein of unknown function (DUF1412) PF07205 Protein of unknown function (DUF1413) PF07208 Protein of unknown function (DUF1414) PF07209 Protein of unknown function (DUF1415) PF07210 Protein of unknown function (DUF1416) PF07211 Protein of unknown function (DUF1417) PF07214 Protein of unknown function (DUF1418) PF07215 Protein of unknown function (DUF1419) PF07220 Protein of unknown function (DUF1420) PF07223 Protein of unknown function (DUF1421) PF07226 Protein of unknown function (DUF1422) PF07227 Protein of unknown function (DUF1423) PF07232 Putative rep protein (DUF1424) PF07233 Protein of unknown function (DUF1425) PF07234 Protein of unknown function (DUF1426) PF07235 Protein of unknown function (DUF1427) PF07237 Protein of unknown function (DUF1428) PF07241 Protein of unknown function (DUF1429) PF02410 Domain of unknown function DUF143 PF07242 Protein of unknown function (DUF1430) PF07248 Protein of unknown function (DUF1431) PF07252 Protein of unknown function (DUF1433) PF07254 Protein of unknown function (DUF1434) PF07256 Protein of unknown function (DUF1435) PF07262 Protein of unknown function (DUF1436) PF07270 Protein of unknown function (DUF1438) PF07273 Protein of unknown function (DUF1439) PF07274 Protein of unknown function (DUF1440) PF07278 Protein of unknown function (DUF1441) PF07279 Protein of unknown function (DUF1442) PF07280 Protein of unknown function (DUF1443) PF07285 Protein of unknown function (DUF1444) PF07286 Protein of unknown function (DUF1445) PF07287 Protein of unknown function (DUF1446) PF07288 Protein of unknown function (DUF1447) PF07289 Protein of unknown function (DUF1448) PF07290 Protein of unknown function (DUF1449) PF07293 Protein of unknown function (DUF1450) PF07295 Protein of unknown function (DUF1451) PF07300 Protein of unknown function (DUF1452) PF07301 Protein of unknown function (DUF1453) PF07305 Protein of unknown function (DUF1454) PF07306 Protein of unknown function (DUF1455) PF07308 Protein of unknown function (DUF1456) PF07311 Protein of unknown function (DUF1458) PF07312 Protein of unknown function (DUF1459) PF07313 Protein of unknown function (DUF1460) PF07314 Protein of unknown function (DUF1461) PF07315 Protein of unknown function (DUF1462) PF07316 Protein of unknown function (DUF1463) PF07318 Protein of unknown function (DUF1464) PF07323 Protein of unknown function (DUF1465) PF07326 Protein of unknown function (DUF1466) PF07330 Protein of unknown function (DUF1467) PF07331 Protein of unknown function (DUF1468) PF07332 Protein of unknown function (DUF1469) PF02457 Domain of unknown function DUF147 PF07336 Protein of unknown function (DUF1470) PF07338 Protein of unknown function (DUF1471) PF07339 Protein of unknown function (DUF1472) PF07341 Protein of unknown function (DUF1473) PF07342 Protein of unknown function (DUF1474) PF07343 Protein of unknown function (DUF1475) PF07345 Protein of unknown function (DUF1476) PF07346 Protein of unknown function (DUF1477) PF07349 Protein of unknown function (DUF1478) PF07350 Protein of unknown function (DUF1479) PF02520 Domain of unknown function DUF148 PF07351 Protein of unknown function (DUF1480) PF07356 Protein of unknown function (DUF1481) PF07358 Protein of unknown function (DUF1482) PF07360 Protein of unknown function (DUF1483) PF07363 Protein of unknown function (DUF1484) PF07364 Protein of unknown function (DUF1485) PF07368 Protein of unknown function (DUF1487) PF07369 Protein of unknown function (DUF1488) PF07370 Protein of unknown function (DUF1489) PF02575 Uncharacterised BCR, YbaB family COG0718 PF07371 Protein of unknown function (DUF1490) PF07372 Protein of unknown function (DUF1491) PF07374 Protein of unknown function (DUF1492) PF07377 Protein of unknown function (DUF1493) PF07379 Protein of unknown function (DUF1494) PF07381 Protein of unknown function (DUF1495) PF07383 Protein of unknown function (DUF1496) PF07384 Protein of unknown function (DUF1497) PF07385 Protein of unknown function (DUF1498) PF07386 Protein of unknown function (DUF1499) PF02576 Uncharacterised BCR, YhbC family COG0779 PF07389 Protein of unknown function (DUF1500) PF07394 Protein of unknown function (DUF1501) PF07397 Repeat of unknown function (DUF1502) PF07398 Protein of unknown function (DUF1503) PF07399 Protein of unknown function (DUF1504) PF07403 Protein of unknown function (DUF1505) PF07405 Protein of unknown function (DUF1506) PF07408 Protein of unknown function (DUF1507) PF07411 Domain of unknown function (DUF1508) PF07420 Protein of unknown function (DUF1509) PF02577 Uncharacterised ACR, COG1259 PF07423 Protein of unknown function (DUF1510) PF07427 Protein of unknown function (DUF1511) PF07431 Protein of unknown function (DUF1512) PF07433 Protein of unknown function (DUF1513) PF07438 Protein of unknown function (DUF1514) PF07439 Protein of unknown function (DUF1515) PF07457 Protein of unknown function (DUF1516) PF07466 Protein of unknown function (DUF1517) PF07469 Domain of unknown function (DUF1518) PF05551 Protein of unknown function (DUF1519) PF02578 Uncharacterised ACR, YfiH family COG1496 PF07480 Domain of Unknown Function (DUF1520) PF07481 Domain of Unknown Function (DUF1521) PF07482 Domain of Unknown Function (DUF1522) PF07509 Protein of unknown function (DUF1523) PF07510 Protein of unknown function (DUF1524) PF07511 Protein of unknown function (DUF1525) PF07512 Protein of unknown function (DUF1526) PF07513 Protein of unknown function (DUF1527) PF07515 Protein of unknown function (DUF1528) PF07485 Domain of Unknown Function (DUF1259) PF06801 Protein of unknown function, DUF1532 PF07550 Protein of unknown function (DUF1533) PF07551 Protein of unknown function (DUF1534) PF07553 Domain of Unknown Function (DUF1535) PF07005 Protein of unknown function, DUF1537 PF07556 Protein of unknown function (DUF1538) PF07560 Domain of Unknown Function (DUF1539) PF07561 Domain of Unknown Function (DUF1540) PF07563 Protein of unknown function (DUF1541) PF07564 Domain of Unknown Function (DUF1542) PF07566 Domain of Unknown Function (DUF1543) PF07570 Protein of unknown function (DUF1545) PF07571 Protein of unknown function (DUF1546) PF07577 Domain of Unknown Function (DUF1547) PF07579 Domain of Unknown Function (DUF1548) PF02582 Uncharacterised ACR, YagE family COG1723 PF07584 Protein of unknown function (DUF1550) PF07585 Protein of unknown function (DUF1551) PF07588 Protein of unknown function (DUF1554) PF07590 Protein of unknown function (DUF1556) PF07591 Protein of unknown function (DUF1557) PF07594 Protein of unknown function (DUF1558) PF02583 Uncharacterised BCR, COG1937 PF07597 Protein of unknown function (DUF1560) PF07598 Protein of unknown function (DUF1561) PF07601 Protein of unknown function (DUF1562) PF07599 Protein of unknown function (DUF1563) PF07600 Protein of unknown function (DUF1564) PF07602 Protein of unknown function (DUF1565) PF07603 Protein of unknown function (DUF1566) PF07604 Protein of unknown function (DUF1567) PF07605 Protein of unknown function (DUF1568) PF07606 Protein of unknown function (DUF1569) PF07607 Protein of unknown function (DUF1570) PF07608 Protein of unknown function (DUF1571) PF07609 Protein of unknown function (DUF1572) PF07610 Protein of unknown function (DUF1573) PF07611 Protein of unknown function (DUF1574) PF07613 Protein of unknown function (DUF1576) PF07614 Protein of unknown function (DUF1577) PF07617 Protein of unknown function (DUF1579) PF07618 Protein of unknown function (DUF1580) PF07619 Protein of unknown function (DUF1581) PF07621 Protein of unknown function (DUF1582) PF07622 Protein of unknown function (DUF1583) PF07625 Protein of unknown function (DUF1586) PF07628 Protein of unknown function (DUF1589) PF02586 Uncharacterised ACR, COG2135 PF07629 Protein of unknown function (DUF1590) PF07632 Protein of unknown function (DUF1593) PF07641 Protein of unknown function (DUF1596) PF07642 Protein of unknown function (DUF1597) PF07643 Protein of unknown function (DUF1598) PF07659 Domain of Unknown Function (DUF1599) PF01519 Protein of unknown function DUF16 PF07667 Protein of unknown function (DUF1600) PF07671 Protein of unknown function (DUF1601) PF07673 Protein of unknown function (DUF1602) PF07674 Protein of unknown function (DUF1603) PF07713 Protein of unknown function (DUF1604) PF07717 Domain of unknown function (DUF1605) PF07752 Protein of unknown function (DUF1608) PF07753 Protein of unknown function (DUF1609) PF02588 Uncharacterized BCR, YitT family COG1284 PF07754 Domain of unknown function (DUF1610) PF07755 Protein of unknown function (DUF1611) PF07756 Protein of unknown function (DUF1612) PF07757 Protein of unknown function (DUF1613) PF07758 Protein of unknown function (DUF1614) PF07759 Protein of unknown function (DUF1615) PF07760 Protein of unknown function (DUF1616) PF07761 Protein of unknown function (DUF1617) PF07762 Protein of unknown function (DUF1618) PF07773 Protein of unknown function (DUF1619) PF02589 Uncharacterised ACR, YkgG family COG1556 PF07774 Protein of unknown function (DUF1620) PF07783 Protein of unknown function (DUF1621) PF07784 Protein of unknown function (DUF1622) PF07785 Protein of unknown function (DUF1623) PF07786 Protein of unknown function (DUF1624) PF07787 Protein of unknown function (DUF1625) PF07788 Protein of unknown function (DUF1626) PF07789 Protein of unknown function (DUF1627) PF07790 Protein of unknown function (DUF1628) PF07791 Protein of unknown function (DUF1629) PF02590 Uncharacterized ACR, COG1576 PF07792 Protein of unknown function (DUF1630) PF07793 Protein of unknown function (DUF1631) PF07857 CEO family (DUF1632) PF07794 Protein of unknown function (DUF1633) PF07843 Protein of unknown function (DUF1634) PF07795 Protein of unknown function (DUF1635) PF07845 Protein of unknown function (DUF1636) PF07847 Protein of unknown function (DUF1637) PF07796 Protein of unknown function (DUF1638) PF07797 Protein of unknown function (DUF1639) PF02591 Putative zinc ribbon domain PF07798 Protein of unknown function (DUF1640) PF07849 Protein of unknown function (DUF1641) PF07852 Protein of unknown function (DUF1642) PF07799 Protein of unknown function (DUF1643) PF07800 Protein of unknown function (DUF1644) PF07816 Protein of unknown function (DUF1645) PF07854 Protein of unknown function (DUF1646) PF07801 Protein of unknown function (DUF1647) PF07853 Protein of unknown function (DUF1648) PF07855 Protein of unknown function (DUF1649) PF02592 Uncharacterized ACR, YhhQ family COG1738 PF07856 Protein of unknown function (DUF1650) PF07864 Protein of unknown function (DUF1651) PF07865 Protein of unknown function (DUF1652) PF07866 Protein of unknown function (DUF1653) PF07867 Protein of unknown function (DUF1654) PF07868 Protein of unknown function (DUF1655) PF07869 Protein of unknown function (DUF1656) PF07870 Protein of unknown function (DUF1657) PF07871 Protein of unknown function (DUF1658) PF07872 Protein of unknown function (DUF1659) PF02593 Uncharacterized ArCR, COG1810 PF07874 Prophage protein (DUF1660) PF07877 Protein of unknown function (DUF1661) PF07878 Protein of unknown function (DUF1662) PF07909 Protein of unknown function (DUF1663) PF07889 Protein of unknown function (DUF1664) PF07891 Protein of unknown function (DUF1666) PF07892 Protein of unknown function (DUF1667) PF07893 Protein of unknown function (DUF1668) PF07894 Protein of unknown function (DUF1669) PF02594 Uncharacterised ACR, YggU family COG1872 PF07900 Protein of unknown function (DUF1670) PF07901 Protein of unknown function (DUF1672) PF07895 Protein of unknown function (DUF1673) PF07896 Protein of unknown function (DUF1674) PF07897 Protein of unknown function (DUF1675) PF07898 Protein of unknown function (DUF1676) PF07911 Protein of unknown function (DUF1677) PF07913 Protein of unknown function (DUF1678) PF07914 Protein of unknown function (DUF1679) PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) PF07933 Protein of unknown function (DUF1681) PF07946 Protein of unknown function (DUF1682) PF07919 Protein of unknown function (DUF1683) PF07920 Protein of unknown function (DUF1684) PF07939 Protein of unknown function (DUF1685) PF07937 Protein of unknown function (DUF1686) PF07955 Protein of unknown function (DUF1687) PF07958 Protein of unknown function (DUF1688) PF07954 Protein of unknown function (DUF1689) PF02596 Uncharacterised ArCR, COG2043 PF07956 Protein of Unknown function (DUF1690) PF07950 Protein of unknown function (DUF1691) PF07970 Protein of unknown function (DUF1692) PF07984 Domain of unknown function (DUF1693) PF07997 Protein of unknown function (DUF1694) PF07998 Putative peptidase (DUF1695) PF08000 Protein of unknown function (DUF1696) PF08002 Protein of unknown function (DUF1697) PF08004 Protein of unknown function (DUF1699) PF08006 Protein of unknown function (DUF1700) PF08012 Protein of unknown function (DUF1702) PF08011 Protein of unknown function (DUF1703) PF08014 Domain of unknown function (DUF1704) PF08019 Domain of unknown function (DUF1705) PF08020 Protein of unknown function (DUF1706) PF08044 Domain of unknown function (DUF1707) PF08101 Domain of unknown function (DUF1708) PF08174 Fungal domain of unknown function (DUF1709) PF02598 Uncharacterized ACR, COG2106 PF08193 Fungal protein of unknown function (DUF1711) PF08217 Fungal domain of unknown function (DUF1712) PF08213 Mitochondrial domain of unknown function (DUF1713) PF08215 Eukaryotic domain of unknown function (DUF1715) PF08216 Eukaryotic domain of unknown function (DUF1716) PF05414 Viral domain of unknown function (DUF1717) PF08224 Domain of unknown function (DUF1719) PF08226 Domain of unknown function (DUF1720) PF08349 Protein of unknown function (DUF1722) PF08330 Protein of unknown function (DUF1723) PF08350 Domain of unknown function (DUF1724) PF08333 Protein of unknown function (DUF1725) PF08351 Domain of unknown function (DUF1726) PF08353 Domain of unknown function (DUF1727) PF08354 Domain of unknown function (DUF1729) PF08331 Domain of unknown function (DUF1730) PF08338 Domain of unknown function (DUF1731) PF08340 Domain of unknown function (DUF1732) PF08522 Domain of unknown function (DUF1735) PF08409 Domain of unknown function (DUF1736) PF08410 Domain of unknown function (DUF1737) PF08401 Domain of unknown function (DUF1738) PF08424 Protein of unknown function (DUF1740) PF08427 Domain of unknown function (DUF1741) PF08432 Fungal protein of unknown function (DUF1742) PF08489 Domain of unknown function (DUF1743) PF08490 Domain of unknown function (DUF1744) PF08495 Domain of unknown function (DUF1745) PF08508 Fungal domain of unknown function (DUF1746) PF08520 Fungal protein of unknown function (DUF1748) PF08538 Protein of unknown function (DUF1749) PF08549 Fungal domain of unknown function (DUF1750) PF08551 Eukaryotic integral membrane protein (DUF1751) PF08550 Fungal protein of unknown function (DUF1752) PF08552 Golgi protein of unknown function (DUF1753) PF08555 Eukaryotic family of unknown function (DUF1754) PF08560 Protein of unknown function (DUF1757) PF05585 Protein of unknown function (DUF1758) PF03564 Protein of unknown function (DUF1759) PF08568 Fungal protein of unknown function (DUF1760) PF08570 Protein of unknown function (DUF1761) PF08574 Protein of unknown function (DUF1762) PF08575 Domain of unknown function (DUF1763) PF08576 Eukaryotic protein of unknown function (DUF1764) PF08578 Protein of unknown function (DUF1765) PF08582 Domain of unknown function (DUF1766) PF08585 Domain of unknown function (DUF1767) PF08719 Domain of unknown function (DUF1768) PF08588 Protein of unknown function (DUF1769) PF02620 Uncharacterized ACR, COG1399 PF08589 Fungal protein of unknown function (DUF1770) PF08590 Domain of unknown function (DUF1771) PF08592 Domain of unknown function (DUF1772) PF08593 Protein of unknown function DUF1773 PF08611 Fungal protein of unknown function (DUF1774) PF07987 Domain of unkown function (DUF1775) PF08643 Fungal family of unknown function (DUF1776) PF08648 Protein of unknown function (DUF1777) PF08681 Protein of unknown function (DUF1778) PF08680 Protein of unknown function (DUF1779) PF02621 Uncharacterized ACR, COG1427 PF08682 Protein of unknown function (DUF1780) PF08683 Protein of unknown function (DUF1781) PF08695 Fungal protein of unknown function (DUF1783) PF08699 Domain of unknown function (DUF1785) PF08735 Putative pyruvate format-lyase activating enzyme (DUF1786) PF08747 Domain of unknown function (DUF1788) PF08748 Domain of unknown function (DUF1789) PF02622 Uncharacterized ACR, COG1678 PF08749 Family of unknown function (DUF1790) PF08754 Domain of unknown function (DUF1791) PF08759 Domain of unknown function (DUF1792) PF08760 Domain of unknown function (DUF1793) PF08768 Domain of unknown function (DUF1794) PF08786 Domain of unknown function (DUF1795) PF08795 Putative papain-like cysteine peptidase (DUF1796) PF08796 Protein of unknown function (DUF1797) PF08807 Bacterial domain of unknown function (DUF1798) PF08809 Phage related hypothetical protein (DUF1799) PF08811 Protein of unknown function (DUF1800) PF08818 Domain of unknown function (DU1801) PF08819 Domain of unknown function (DUF1802) PF08820 Domain of unknown function (DUF1803) PF08822 Protein of unknown function (DUF1804) PF08827 Domain of unknown function (DUF1805) PF08830 Protein of unknown function (DUF1806) PF08837 Protein of unknown function (DUF1810) PF08838 Protein of unknown function (DUF1811) PF08842 Protein of unknown function (DUF1812) PF08845 HSP20-like domain of unknown function (DUF1813) PF08843 Domain of unknown function (DUF1814) PF08844 Domain of unknown function (DUF1815) PF08846 Domain of unknown function (DUF1816) PF08847 Domain of unknown function (DUF1817) PF08848 Domain of unknown function (DUF1818) PF08849 Putative inner membrane protein (DUF1819) PF08850 Domain of unknown function (DUF1820) PF08851 Domain of unknown function (DUF1821) PF08852 Protein of unknown function (DUF1822) PF08853 Domain of unknown function (DUF1823) PF08854 Domain of unknown function (DUF1824) PF08855 Domain of unknown function (DUF1825) PF08856 Protein of unknown function (DUF1826) PF08860 Domain of unknown function (DUF1827) PF08861 Domain of unknown function DUF1828 PF08862 Domain of unknown function DUF1829 PF08865 Domain of unknown function (DUF1830) PF08866 Domain of unknown function (DUF1831) PF08870 Domain of unknown function (DUF1832) PF08875 Domain of unknown function (DUF1833) PF08873 Domain of unknown function (DUF1834) PF08874 Domain of unknown function (DUF1835) PF08876 Domain of unknown function (DUF1836) PF08878 Domain of unknown function (DUF1837) PF08894 Protein of unknown function (DUF1838) PF08893 Domain of unknown function (DUF1839) PF08895 Domain of unknown function (DUF1840) PF08897 Domain of unknown function (DUF1841) PF08896 Domain of unknown function (DUF1842) PF08898 Domain of unknown function (DUF1843) PF08899 Domain of unknown function (DUF1844) PF08900 Domain of unknown function (DUF1845) PF08903 Domain of unknown function (DUF1846) PF08901 Protein of unknown function (DUF1847) PF08902 Domain of unknown function (DUF1848) PF08904 Domain of unknown function (DUF1849) PF02636 Uncharacterized ACR, COG1565 PF08905 Domain of unknown function (DUF1850) PF08906 Domain of unknown function (DUF1851) PF08908 Domain of unknown function (DUF1852) PF08907 Domain of unknown function (DUF1853) PF08909 Domain of unknown function (DUF1854) PF08910 Protein of unknown function (DUF1855) PF08983 Domain of unknown function (DUF1856) PF08982 Domain of unknown function (DUF1857) PF08984 Domain of unknown function (DUF1858) PF08948 Domain of unknown function (DUF1859) PF08949 Domain of unknown function (DUF1860) PF08950 Protein of unknown function (DUF1861) PF08957 Protein of unknown function (DUF1862) PF08937 Domain of unknown function (DUF1863) PF08933 Domain of unknown function (DUF1864) PF08935 Domain of unknown function (DUF1865) PF08952 Domain of unknown function (DUF1866) PF08981 Domain of unknown function (DUF1867) PF08975 Domain of unknown function (DUF1868) PF08956 Domain of unknown function (DUF1869) PF02638 Uncharacterised BCR, COG1649 PF08965 Domain of unknown function (DUF1870) PF08958 Domain of unknown function (DUF1871) PF08959 Domain of unknown function (DUF1872) PF08969 Domain of unknown function (DUF1873) PF08960 Domain of unknown function (DUF1874) PF08961 Domain of unknown function (DUF1875) PF08962 Domain of unknown function (DUF1876) PF08974 Domain of unknown function (DUF1877) PF08963 Protein of unknown function (DUF1878) PF09170 Domain of unknown function (DUF1879) PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PF08976 Domain of unknown function (DUF1880) PF08964 Protein of unkown function (DUF1881) PF08966 Domain of unknown function (DUF1882) PF08980 Domain of unknown function (DUF1883) PF08967 Domain of unknown function (DUF1884) PF08968 Domain of unknown function (DUF1885) PF09171 Domain of unknown function (DUF1886) PF09002 Domain of unknown function (DUF1887) PF08985 Domain of unknown function (DUF1888) PF08986 Domain of unknown function (DUF1889) PF09001 Domain of unknown function (DUF1890) PF09004 Domain of unknown function (DUF1891) PF08987 Protein of unknown function (DUF1892) PF08973 Domain of unknown function (DUF1893) PF08979 Domain of unknown function (DUF1894) PF08988 Protein of unknown function (DUF1895) PF08989 Domain of unknown function (DUF1896) PF09005 Domain of unknown function (DUF1897) PF09011 Domain of unknown function (DUF1898) PF08953 Domain of unknown function (DUF1899) PF01579 Domain of unknown function DUF19 PF02641 Uncharacterized ACR, COG1993 PF08954 Domain of unknown function (DUF1900) PF08955 Domain of unkown function (DUF1901) PF08972 Domain of unknown function (DUF1902) PF08991 Domain of unknown function (DUF1903) PF08921 Domain of unknown function (DUF1904) PF08922 Domain of unknown function (DUF1905) PF08924 Domain of unknown function (DUF1906) PF08925 Domain of Unknown Function (DUF1907) PF08926 Domain of unknown function (DUF1908) PF08927 Domain of unknown function (DUF1909) PF02642 Uncharacterized ACR, COG2107 PF08928 Domain of unknown function (DUF1910) PF08929 Domain of unknown function (DUF1911) PF08930 Domain of unknown function (DUF1912) PF08931 Domain of unknown function (DUF1913) PF08932 Domain of unknown function (DUF1914) PF08938 Domain of unknown function (DUF1916) PF08939 Domain of unknown function (DUF1917) PF08940 Domain of unknown function (DUF1918) PF08942 Domain of unknown function (DUF1919) PF02643 Uncharacterized ACR, COG1430 PF09012 Protein of unknown function (DUF1920) PF09081 Domain of unknown function (DUF1921) PF09082 Domain of unknown function (DUF1922) PF09083 Domain of unknown function (DUF1923) PF09086 Domain of unknown function (DUF1924) PF09094 Domain of unknown function (DUF1925) PF09095 Domain of unknown function (DUF1926) PF09099 Domain of unknown function (DUF1927) PF09100 Domain of unknown function (DUF1928) PF09118 Domain of unknown function (DUF1929) PF09122 Domain of unknown function (DUF1930) PF09123 Domain of unknown function (DUF1931) PF09130 Domain of unknown function (DUF1932) PF09147 Domain of unknown function (DUF1933) PF09148 Domain of unknown function (DUF1934) PF09149 Domain of unknown function (DUF1935) PF09151 Domain of unknown function (DUF1936) PF09152 Domain of unknown function (DUF1937) PF09153 Domain of unknown function (DUF1938) PF09154 Domain of unknown function (DUF1939) PF09155 Domain of unknown function (DUF1940) PF09161 Protein of unknown function (DUF1941) PF09167 Domain of unknown function (DUF1942) PF09172 Domain of unknown function (DUF1943) PF09175 Domain of unknown function (DUF1944) PF09178 Domain of unknown function (DUF1945) PF09179 Domain of unkown function (DUF1946) PF09183 Domain of unknown function (DUF1947) PF09185 Domain of unknown function (DUF1948) PF09186 Domain of unknown function (DUF1949) PF09187 Domain of unknown function(DUF1950) PF09188 Domain of unknown function (DUF1951) PF09189 Domain of unknown function (DUF1952) PF09196 Domain of unknown function (DUF1953) PF09199 Domain of unknown function (DUF1954) PF09205 Domain of unknown function (DUF1955) PF09209 Domain of unknown function (DUF1956) PF09210 Domain of unknown function (DUF1957) PF09211 Domain of unknown function (DUF1958) PF09218 Domain of unknown function (DUF1959) PF02647 Uncharacterized ACR, COG1343 PF09224 Domain of unknown function (DUF1961) PF09227 Domain of unknown function (DUF1962) PF09234 Domain of unknown function (DUF1963) PF09244 Domain of unknown function (DUF1964) PF09248 Domain of unknown function (DUF1965) PF09260 Domain of unknown function (DUF1966) PF09269 Domain of unknown function (DUF1967) PF09291 Domain of unknown function (DUF1968) PF09298 Domain of unknown function (DUF1969) PF09301 Domain of unknown function (DUF1970) PF09313 Domain of unknown function (DUF1971) PF09314 Domain of unknown function (DUF1972) PF09315 Domain of unknown function (DUF1973) PF09317 Domain of unknown function (DUF1974) PF09318 Domain of unknown function (DUF1975) PF09319 Domain of unknown function (DUF1976) PF09320 Domain of unknown function (DUF1977) PF09321 Domain of unknown function (DUF1978) PF09322 Domain of unknown function (DUF1979) PF02649 Uncharacterized ACR, COG1469 PF09323 Domain of unknown function (DUF1980) PF09324 Domain of unknown function (DUF1981) PF09326 Domain of unknown function (DUF1982) PF09327 Domain of unknown function (DUF1983) PF09328 Domain of unknown function (DUF1984) PF09331 Domain of unknown function (DUF1985) PF09342 Domain of unknown function (DUF1986) PF09345 Domain of unknown function (DUF1987) PF09347 Domain of unknown function (DUF1989) PF02650 Uncharacterized BCR, COG1481 PF09348 Domain of unknown function (DUF1990) PF09350 Domain of unknown function (DUF1992) PF09351 Domain of unknown function (DUF1993) PF09352 Domain of unknown function (DUF1994) PF09353 Domain of unknown function (DUF1995) PF09362 Domain of unknown function (DUF1996) PF09366 Protein of unknown function (DUF1997) PF09369 Domain of unknown function (DUF1998) PF09390 Protein of unknown function (DUF1999) PF09391 Protein of unknown function (DUF2000) PF09393 Protein of unknown function (DUF2001) PF09400 Protein of unknown function (DUF2002) PF09404 Eukaryotic protein of unknown function (DUF2003) PF09406 Protein of unknown function (DUF2004) PF09407 Protein of unknown function (DUF2005) PF09410 Proteins of unknown function (DUF2006) PF09413 Protein of unknown function (DUF2007) PF09415 Protein of unknown function (DUF2008) PF09418 Protein of unknown function (DUF2009) PF09419 Protein of unknown function PF09428 Fungal protein of unknown function (DUF2011) PF09430 Protein of unknown function (DUF2012) PF09431 Protein of unknown function (DUF2013) PF09427 Domain of unknown function (DUF2014) PF09435 Fungal protein of unknown function (DUF2015) PF09436 Domain of unknown function (DUF2016) PF09438 Domain of unknown function (DUF2017) PF09442 Domain of unknown function (DUF2018) PF09450 Domain of unknown function (DUF2019) PF02656 Domain of unknown function DUF PF09449 Domain of unknown function (DUF2020) PF09464 Domain of unknown function (DUF2021) PF09633 Protein of unknown function (DUF2023) PF09630 Domain of unknown function (DUF2024) PF09634 Protein of unknown function (DUF2025) PF09641 Protein of unknown function (DUF2026) PF09640 Domain of unknown function (DUF2027) PF09667 Domain of unknown function (DUF2028) PF09594 Protein of unknown function (DUF2029) PF09592 Protein of unknown function (DUF2031) PF02659 Domain of unknown function DUF PF02660 Domain of unknown function DUF PF02677 Uncharacterized BCR, COG1636 PF01595 Domain of unknown function DUF21 PF02680 Uncharacterized ArCR, COG1888 PF02681 Divergent PAP2 family PF02688 Domain of unknown function DUF215 PF02697 Uncharacterized ACR, COG1753 PF02698 DUF218 domain PF01629 Domain of unknown function DUF22 PF02713 Domain of unknown function DUF220 PF02714 Domain of unknown function DUF221 PF02720 Domain of unknown function DUF222 PF02721 Domain of unknown function DUF223 PF02795 Domain of unknown function (DUF225) PF02890 Borrelia family of unknown function DUF226 PF02958 Domain of unknown function (DUF227) PF02989 Lyme disease proteins of unknown function PF02995 Protein of unknown function (DUF229) PF01697 Domain of unknown function PF03003 Poxvirus proteins of unknown function PF03005 Arabidopsis proteins of unknown function PF03027 Odorant binding protein PF03008 Archaea bacterial proteins of unknown function PF03057 Protein of unknown function PF03072 MG032/MG096/MG288 family 1 PF03080 Arabidopsis proteins of unknown function PF01638 HxlR-like helix-turn-helix PF03086 MG032/MG096/MG288 family 2 PF03087 Arabidopsis protein of unknown function PF03103 Domain of unknown function (DUF243) PF03112 Uncharacterized protein family (ORF7) DUF PF03136 Putative proteasome component PF03138 Plant protein family PF03140 Plant protein of unknown function PF03141 Putative methyltransferase PF03158 Multigene family 530 protein PF03190 Protein of unknown function, DUF255 PF03192 Pyrococcus protein of unknown function, DUF257 PF03193 Protein of unknown function, DUF258 PF01657 Domain of unknown function DUF26 PF03195 Protein of unknown function DUF260 PF03196 Protein of unknown function, DUF261 PF03235 Protein of unknown function DUF262 PF03236 Domain of unknown function DUF263 PF03266 Protein of unknown function, DUF265 PF03267 Domain of unknown function, DUF266 PF03268 Caenorhabditis protein of unknown function, DUF267 PF03269 Caenorhabditis protein of unknown function, DUF268 PF03270 Protein of unknown function, DUF269 PF03189 Protein of unknown function, DUF270 PF03407 Protein of unknown function (DUF271) PF03312 Protein of unknown function, DUF272 PF03314 Protein of unknown function, DUF273 PF03409 Protein of unknown function (DUF274) PF03316 Actinomycetales protein of unknown function, DUF275 PF03434 DUF276 PF03353 DUF278 PF01709 Domain of unknown function DUF28 PF03436 Domain of unknown function (DUF281) PF03380 Caenorhabditis protein of unknown function, DUF282 PF03382 Mycoplasma protein of unknown function, DUF285 PF03384 Drosophila protein of unknown function, DUF287 PF03385 Protein of unknown function, DUF288 PF01724 Domain of unknown function DUF29 PF01060 Transthyretin-like family PF03442 Domain of unknown function PF03398 Eukaryotic protein of unknown function, DUF292 PF03444 Domain of unknown function PF03445 Putative nucleotidyltransferase DUF294 PF03478 Protein of unknown function (DUF295) PF03479 Domain of unknown function (DUF296) PF03537 TM1410 hypothetical-related protein PF03556 Domain of unknown function (DUF298) PF03618 Domain of unknown function (DUF299) PF01727 Domain of unknown function DUF30 PF03619 Domain of unknown function PF03625 Domain of unknown function DUF302 PF03629 Domain of unknown function (DUF303) PF03703 Bacterial membrane flanked domain PF03713 Domain of unknown function (DUF305) PF03733 Domain of unknown function (DUF307) PF03729 Short repeat of unknown function (DUF308) PF03745 Domain of unknown function (DUF309) PF01732 Domain of unknown function DUF31 PF03750 Protein of unknown function (DUF310) PF03754 Domain of unknown function (DUF313) PF03761 Domain of unknown function (DUF316) PF03773 Predicted permease PF03777 Small secreted domain (DUF320) PF03778 Protein of unknown function (DUF321) PF03780 Protein of unknown function (DUF322) PF03781 Domain of unknown function (DUF323) PF03804 Viral domain of unknown function PF03860 Domain of Unknown Function (DUF326) PF03885 Protein of unknown function (DUF327) PF03883 Protein of unknown function (DUF328) PF03884 Domain of unknown function (DUF329) PF03886 Protein of unknown function (DUF330) PF03889 Domain of unknown function PF03891 Domain of unknown function (DUF333) PF03904 Domain of unknown function (DUF334) PF03926 Putative metallopeptidase (SprT family) PF03928 Domain of unknown function (DUF336) PF03937 Protein of unknown function (DUF339) PF03956 Membrane protein of unknown function (DUF340) PF03961 Protein of unknown function (DUF342) PF03984 Repeat of unknown function (DUF346) PF03988 Repeat of Unknown Function (DUF347) PF03990 Domain of unknown function (DUF348) PF03993 Domain of Unknown Function (DUF349) PF01796 Domain of unknown function DUF35 PF03994 Domain of Unknown Function (DUF350) PF04007 Protein of unknown function (DUF354) PF04009 Protein of unknown function (DUF356) PF04010 Protein of unknown function (DUF357) PF04013 Protein of unknown function (DUF358) PF04019 Protein of unknown function (DUF359) PF04020 Membrane protein of unknown function PF04021 Protein of unknown function (DUF361) PF04015 Domain of unknown function (DUF362) PF04016 Domain of unknown function (DUF364) PF04033 Domain of unknown function (DUF365) PF04017 Domain of unknown function (DUF366) PF04034 Domain of unknown function (DUF367) PF04018 Domain of unknown function (DUF368) PF04126 Domain of unknown function (DUF369) PF01809 Domain of unknown function DUF37 PF04025 Domain of unknown function (DUF370) PF04027 Domain of unknown function (DUF371) PF04036 Domain of unknown function (DUF372) PF04123 Domain of unknown function (DUF373) PF04028 Domain of unknown function (DUF374) PF04040 Domain of unknown function (DUF375) PF04041 Domain of unknown function (DUF377) PF04070 Domain of unknown function (DUF378) PF04038 Domain of unknown function (DUF381) PF04037 Domain of unknown function (DUF382) PF04063 Domain of unknown function (DUF383) PF04064 Domain of unknown function (DUF384) PF04075 Domain of unknown function (DUF385) PF04074 Domain of unknown function (DUF386) PF04079 Putative transcriptional regulators (Ypuh-like) PF04076 Domain unknown function (DUF388) PF04087 Domain of unknown function (DUF389) PF01837 Domain of unknown function DUF39 PF04094 Protein of unknown function (DUF390) PF04134 Protein of unknown function, DUF393 PF04143 YeeE/YedE family (DUF395) PF04149 Domain of unknown function (DUF397) PF04187 Protein of unknown function, DUF399 PF04164 Protein of unknown function, DUF400 PF04165 Protein of unknown function (DUF401) PF04167 Protein of unknown function (DUF402) PF04168 Bacterial domain of unknown function (DUF403) PF04169 Domain of unknown function (DUF404) PF04171 Protein of unknown function (DUF405) PF04175 Protein of unknown function (DUF406) PF04174 Domain of unknown function (DUF407) PF04181 Domain of Unknown Function (DUF408) PF04190 Protein of unknown function (DUF410) PF04214 Protein of unknown function, DUF PF04217 Protein of unknown function, DUF412 PF04219 Protein of unknown function, DUF PF04220 Protein of unknown function, DUF414 PF04222 Protein of unknown function, DUF PF04224 Protein of unknown function, DUF417 PF04235 Protein of unknown function (DUF418) PF04237 Protein of unknown function (DUF419) PF04238 Protein of unknown function (DUF420) PF04239 Protein of unknown function (DUF421) PF04240 Protein of unknown function (DUF422) PF04241 Protein of unknown function (DUF423) PF04242 Protein of unknown function (DUF424) PF04248 Domain of unknown function (DUF427) PF04250 Protein of unknown function (DUF429) PF01861 Protein of unknown function DUF43 PF04252 Protein of unknown function (DUF431) PF04254 Protein of unknown function (DUF432) PF04255 Protein of unknown function (DUF433) PF04256 Protein of unknown function (DUF434) PF04260 Protein of unknown function (DUF436) PF04282 Family of unknown function (DUF438) PF04283 Protein of unknown function (DUF439) PF04269 Protein of unknown function, DUF440 PF04284 Protein of unknown function (DUF441) PF04273 Putative phosphatase (DUF442) PF04276 Protein of unknown function (DUF443) PF04285 Protein of unknown function (DUF444) PF04286 Protein of unknown function (DUF445) PF04287 Domain of unknown function, DUF446 PF04289 Protein of unknown function (DUF447) PF04296 Protein of unknown function (DUF448) PF01863 Protein of unknown function DUF45 PF04301 Protein of unknown function (DUF452) PF04303 Protein of unknown function (DUF453) PF04304 Protein of unknown function (DUF454) PF04305 Protein of unknown function (DUF455) PF04306 Protein of unknown function (DUF456) PF04307 Predicted membrane-bound metal-dependent hydrolase (DUF457) PF04308 Protein of unknown function (DUF458) PF04311 Protein of unknown function (DUF459) PF01864 Putative integral membrane protein DUF46 PF04312 Protein of unknown function (DUF460) PF04314 Protein of unknown function (DUF461) PF04315 Protein of unknown function, DUF462 PF04317 YcjX-like family, DUF463 PF04327 Protein of unknown function (DUF464) PF04325 Protein of unknown function (DUF465) PF04328 Protein of unknown function (DUF466) PF04318 Protein of unknown function (DUF468) PF04320 Protein with unknown function (DUF469) PF04329 Family of unknown function (DUF470) PF04330 Family of unknown function (DUF471) PF04331 Family of unknown function (DUF472) PF04322 Protein of unknown function (DUF473) PF04323 Protein of unknown function (DUF474) PF04332 Protein of unknown function (DUF475) PF04536 Domain of unknown function (DUF477) PF04334 Protein of unknown function (DUF478) PF04336 Protein of unknown function, DUF479 PF01867 Protein of unknown function DUF48 PF04337 Protein of unknown function, DUF480 PF04338 Protein of unknown function, DUF481 PF04339 Protein of unknown function, DUF482 PF04467 Protein of unknown function (DUF483) PF04340 Protein of unknown function, DUF484 PF04341 Protein of unknown function, DUF485 PF04342 Protein of unknown function, DUF486 PF04343 Protein of unknown function, DUF488 PF04356 Protein of unknown function (DUF489) PF04357 Family of unknown function (DUF490) PF04359 Protein of unknown function (DUF493) PF04361 Protein of unknown function (DUF494) PF04363 Protein of unknown function (DUF496) PF04365 Protein of unknown function (DUF497) PF04430 Protein of unknown function (DUF498/DUF598) PF04465 Protein of unknown function (DUF499) PF04366 Family of unknown function (DUF500) PF04417 Protein of unknown function (DUF501) PF04367 Protein of unknown function (DUF502) PF04456 Protein of unknown function (DUF503) PF04457 Protein of unknown function (DUF504) PF04458 Protein of unknown function (DUF505) PF04720 Protein of unknown function (DUF506) PF04368 Protein of unknown function (DUF507) PF04370 Domain of unknown function (DUF508) PF04416 Protein of unknown function (DUF509) PF04373 Protein of unknown function (DUF511) PF04459 Protein of unknown function (DUF512) PF04415 Protein of unknown function (DUF515) PF04378 Protein of unknown function (DUF519) PF04461 Protein of unknown function (DUF520) PF04412 Protein of unknown function (DUF521) PF04462 Protein of unknown function (DUF522) PF04463 Protein of unknown function (DUF523) PF04411 Protein of unknown function (DUF524) PF04379 Protein of unknown function (DUF525) PF04380 Protein of unknown function (DUF526) PF04384 Protein of unknown function (DUF528) PF04409 Protein of unknown function (DUF530) PF04407 Protein of unknown function (DUF531) PF04391 Protein of unknown function (DUF533) PF04393 Protein of unknown function (DUF535) PF04394 Protein of unknown function, DUF536 PF04396 Protein of unknown function, DUF537 PF04398 Protein of unknown function, DUF538 PF04400 Protein of unknown function (DUF539) PF01877 Protein of unknown function DUF54 PF04401 Protein of unknown function (DUF540) PF04402 Protein of unknown function (DUF541) PF04418 Domain of unknown function (DUF543) PF04424 Protein of unknown function (DUF544) PF04784 Protein of unknown function, DUF547 PF04445 Protein of unknown function (DUF548) PF01878 Protein of unknown function DUF55 PF04447 Protein of unknown function (DUF550) PF04448 Protein of unknown function (DUF551) PF04472 Protein of unknown function (DUF552) PF04473 Protein of unknown function (DUF553) PF04474 Protein of unknown function (DUF554) PF04475 Protein of unknown function (DUF555) PF04476 Protein of unknown function (DUF556) PF04477 Protein of unknown function (DUF557) PF04480 Protein of unknown function (DUF559) PF04575 Protein of unknown function (DUF560) PF04481 Protein of unknown function (DUF561) PF04763 Protein of unknown function (DUF562) PF04577 Protein of unknown function (DUF563) PF04482 Protein of unknown function (DUF564) PF04483 Protein of unknown function (DUF565) PF04484 Family of unknown function (DUF566) PF04525 Protein of unknown function (DUF567) PF04526 Protein of unknown function (DUF568) PF04601 Protein of unknown function (DUF569) PF01881 Protein of unknown function DUF57 PF04489 Protein of unknown function (DUF570) PF04600 Protein of unknown function (DUF571) PF04502 Family of unknown function (DUF572) PF04504 Protein of unknown function, DUF573 PF04672 Protein of unknown function (DUF574) PF04746 Protein of unknown function (DUF575) PF04507 Protein of unknown function, DUF576 PF04510 Family of unknown function (DUF577) PF04669 Protein of unknown function (DUF579) PF01882 Protein of unknown function DUF58 PF04515 Protein of unknown function, DUF580 PF04570 Protein of unknown function (DUF581) PF04518 Protein of unknown function, DUF582 PF04519 Protein of unknown function, DUF583 PF04520 Protein of unknown function, DUF584 PF04522 Protein of unknown function (DUF585) PF04524 Protein of unknown function, DUF586 PF04532 Protein of unknown function (DUF587) PF04535 Domain of unknown function (DUF588) PF01883 Domain of unknown function DUF59 PF04547 Protein of unknown function, DUF590 PF04569 Protein of unknown function PF04574 Protein of unknown function (DUF592) PF04576 Protein of unknown function, DUF593 PF04578 Protein of unknown function, DUF594 PF04590 Protein of unknown function, DUF595 PF04591 Protein of unknown function, DUF596 PF04654 Protein of unknown function, DUF599 PF00892 Integral membrane protein D