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Basic Local Alignment Search Tool (BLAST) allows you to compare a protein or DNA sequence (the "query") to a database of other DNA or protein sequences. The main BLAST server is located at the National Center for Biotechnology Information (NCBI). The NCBI site offers excellent BLAST tutorials.
| BLAST at NCBI |
| Algorithm | Description |
|---|---|
| Position Specific Interated BLAST | |
| Pattern hit initiated BLAST | |
| For large DNA queries | |
| Reverse position specific BLAST | |
| EMBL/European Bioinformatics Institute | |
| EMBL/European Bioinformatics Institute | |
| Genome Sequencing Center, Washington U. | |
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EMBL/European Bioinformatics Institute |
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EMBL |
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Institut Pasteur |
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Mouse Genome Informatics at Jackson Labs |
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Transcript assembly program |
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The Institute for Genomic Research |
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| Swiss Institute of Bioinformatics and the Swiss Center for Scientific Computing | |
| DNA Database of Japan | |
| DNA Database of Japan | |
| DNA Database of Japan | |
| DNA Database of Japan | |
| From the University of Virginia (Bill Pearson) | |
| From the University of Virginia (Bill Pearson) | |
| BLAST search updater | |
| Searches the Kyoto Encyclopedia of Genes and Genomes | |
| Used for analysis of BLAST results |
| Baylor College of Medicine | |
| From NCBI | |
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